PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
PON32004.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON33507.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON33508.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON35618.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON48512.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON48851.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON50928.1[Trema Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PON55316.1[Trema Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PON67191.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON68368.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON68372.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON68373.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON73804.1[Trema Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
PON73823.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON74668.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON77411.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON80864.1[Trema Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
PON81595.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON82022.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON83657.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON85243.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON87307.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON87309.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON88111.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON89411.1[Trema Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PON89890.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON90511.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON90985.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON90994.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON91486.1[Trema Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PON94250.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON95947.1[Trema Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
PON96405.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON96412.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
PON96413.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
POO03305.1[Trema Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
POO03634.1[Trema Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH