PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
PON32197.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON40961.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON43191.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON43380.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON43382.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON43384.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON43385.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON48908.1[Trema Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
PON49519.1[Trema Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
PON49520.1[Trema Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
PON49521.1[Trema Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
PON61012.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON61013.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON69473.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON83979.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON84991.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON86174.1[Trema Alkaloid NCS low borderline NCS__00005__sp_Q67A25_NCS_THLFG
PON86470.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON88199.1[Trema Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
PON88200.1[Trema Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
PON88205.1[Trema Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
PON88212.1[Trema Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
PON88213.1[Trema Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
PON88218.1[Trema Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
PON90837.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON92444.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
PON95087.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
POO00447.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
POO00830.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
POO03038.1[Trema Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA