PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
PON33269.1[Trema Steroid CYP90D1 low borderline
PON40931.1[Trema Steroid CYP90D1 low borderline
PON41036.1[Trema Steroid CYP90D1 medium borderline
PON42663.1[Trema Steroid CYP90D1 low borderline
PON49923.1[Trema Steroid CYP90D1 low borderline
PON55046.1[Trema Steroid CYP90D1 low borderline
PON56872.1[Trema Steroid CYP90D1 medium borderline
PON59360.1[Trema Steroid CYP90D1 low borderline
PON59361.1[Trema Steroid CYP90D1 low borderline
PON59364.1[Trema Steroid CYP90D1 low borderline
PON62658.1[Trema Steroid CYP90D1 medium borderline
PON64080.1[Trema Steroid CYP90D1 low borderline
PON64466.1[Trema Steroid CYP90D1 low borderline
PON64468.1[Trema Steroid CYP90D1 low borderline
PON77824.1[Trema Steroid CYP90D1 low borderline
PON78489.1[Trema Steroid CYP90D1 low borderline
PON82034.1[Trema Steroid CYP90D1 low borderline
PON82815.1[Trema Steroid CYP90D1 low borderline
PON84525.1[Trema Steroid CYP90D1 low borderline
PON85094.1[Trema Steroid CYP90D1 low borderline
PON85217.1[Trema Steroid CYP90D1 medium borderline
PON85219.1[Trema Steroid CYP90D1 medium borderline
PON85221.1[Trema Steroid CYP90D1 low borderline
PON86075.1[Trema Steroid CYP90D1 medium borderline
PON86617.1[Trema Steroid CYP90D1 medium borderline
PON89551.1[Trema Steroid CYP90D1 low borderline
PON89553.1[Trema Steroid CYP90D1 low borderline
PON91640.1[Trema Steroid CYP90D1 low borderline
PON91644.1[Trema Steroid CYP90D1 low borderline
PON92922.1[Trema Steroid CYP90D1 low borderline
PON94057.1[Trema Steroid CYP90D1 low borderline
PON94069.1[Trema Steroid CYP90D1 low borderline
PON94075.1[Trema Steroid CYP90D1 low borderline
PON94076.1[Trema Steroid CYP90D1 low borderline
PON96135.1[Trema Steroid CYP90D1 medium borderline
PON99151.1[Trema Steroid CYP90D1 low borderline
PON99735.1[Trema Steroid CYP90D1 low borderline
PON99770.1[Trema Steroid CYP90D1 low borderline
POO00374.1[Trema Steroid CYP90D1 medium borderline
POO00378.1[Trema Steroid CYP90D1 medium borderline
POO00380.1[Trema Steroid CYP90D1 medium borderline
POO01869.1[Trema Steroid CYP90D1 low borderline
POO02544.1[Trema Steroid CYP90D1 medium borderline
POO02655.1[Trema Steroid CYP90D1 low borderline
POO03137.1[Trema Steroid CYP90D1 low borderline