PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
PON33269.1[Trema Alkaloid T3O medium borderline
PON33731.1[Trema Alkaloid T3O medium borderline
PON35276.1[Trema Alkaloid T3O medium borderline
PON36395.1[Trema Alkaloid T3O medium borderline
PON36396.1[Trema Alkaloid T3O medium borderline
PON36405.1[Trema Alkaloid T3O medium pass
PON36810.1[Trema Alkaloid T3O medium borderline
PON37806.1[Trema Alkaloid T3O medium borderline
PON40897.1[Trema Alkaloid T3O low borderline
PON40931.1[Trema Alkaloid T3O medium borderline
PON44277.1[Trema Alkaloid T3O low borderline
PON46381.1[Trema Alkaloid T3O medium borderline
PON46382.1[Trema Alkaloid T3O medium borderline
PON46383.1[Trema Alkaloid T3O medium borderline
PON46384.1[Trema Alkaloid T3O medium borderline
PON46460.1[Trema Alkaloid T3O low borderline
PON46885.1[Trema Alkaloid T3O medium borderline
PON46894.1[Trema Alkaloid T3O medium borderline
PON47612.1[Trema Alkaloid T3O medium pass
PON48515.1[Trema Alkaloid T3O medium borderline
PON49923.1[Trema Alkaloid T3O medium borderline
PON53414.1[Trema Alkaloid T3O medium borderline
PON55045.1[Trema Alkaloid T3O medium borderline
PON55046.1[Trema Alkaloid T3O medium borderline
PON57981.1[Trema Alkaloid T3O medium pass
PON59223.1[Trema Alkaloid T3O medium borderline
PON59365.1[Trema Alkaloid T3O medium borderline
PON62660.1[Trema Alkaloid T3O low borderline
PON64080.1[Trema Alkaloid T3O medium borderline
PON70320.1[Trema Alkaloid T3O medium borderline
PON72164.1[Trema Alkaloid T3O low borderline
PON74624.1[Trema Alkaloid T3O medium borderline
PON74627.1[Trema Alkaloid T3O medium borderline
PON74634.1[Trema Alkaloid T3O medium borderline
PON74642.1[Trema Alkaloid T3O medium borderline
PON74657.1[Trema Alkaloid T3O low borderline
PON77824.1[Trema Alkaloid T3O medium pass
PON78488.1[Trema Alkaloid T3O medium pass
PON78489.1[Trema Alkaloid T3O medium pass
PON81362.1[Trema Alkaloid T3O medium pass
PON82086.1[Trema Alkaloid T3O medium pass
PON82139.1[Trema Alkaloid T3O low borderline
PON82278.1[Trema Alkaloid T3O medium borderline
PON82420.1[Trema Alkaloid T3O medium borderline
PON82421.1[Trema Alkaloid T3O medium borderline
PON82815.1[Trema Alkaloid T3O medium borderline
PON83146.1[Trema Alkaloid T3O low borderline
PON83574.1[Trema Alkaloid T3O medium borderline
PON84337.1[Trema Alkaloid T3O low borderline
PON85216.1[Trema Alkaloid T3O medium pass