PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
PON41968.1[Trema Flavonoid 4CL low borderline
PON42056.1[Trema Flavonoid 4CL low borderline
PON44718.1[Trema Flavonoid 4CL medium pass
PON44719.1[Trema Flavonoid 4CL low borderline
PON50514.1[Trema Flavonoid 4CL low borderline
PON54984.1[Trema Flavonoid 4CL medium pass
PON59855.1[Trema Flavonoid 4CL low borderline
PON62423.1[Trema Flavonoid 4CL medium pass
PON67159.1[Trema Flavonoid 4CL medium pass
PON68279.1[Trema Flavonoid 4CL medium pass
PON70491.1[Trema Flavonoid 4CL medium pass
PON71776.1[Trema Flavonoid 4CL medium pass
PON72199.1[Trema Flavonoid 4CL medium pass
PON82710.1[Trema Flavonoid 4CL medium pass
PON82715.1[Trema Flavonoid 4CL medium pass
PON82716.1[Trema Flavonoid 4CL medium pass
PON82803.1[Trema Flavonoid 4CL medium pass
PON83587.1[Trema Flavonoid 4CL low borderline
PON85319.1[Trema Flavonoid 4CL medium pass
PON86270.1[Trema Flavonoid 4CL medium pass
PON86421.1[Trema Flavonoid 4CL medium pass
PON87982.1[Trema Flavonoid 4CL low borderline
PON88404.1[Trema Flavonoid 4CL low borderline
PON90428.1[Trema Flavonoid 4CL medium pass
PON90453.1[Trema Flavonoid 4CL medium pass
PON93226.1[Trema Flavonoid 4CL medium pass
PON94724.1[Trema Flavonoid 4CL medium pass
PON95302.1[Trema Flavonoid 4CL medium pass
PON95488.1[Trema Flavonoid 4CL low borderline
PON97928.1[Trema Flavonoid 4CL medium pass
PON98295.1[Trema Flavonoid 4CL medium pass
PON98296.1[Trema Flavonoid 4CL medium pass
PON98298.1[Trema Flavonoid 4CL medium pass
PON98606.1[Trema Flavonoid 4CL medium pass
POO00119.1[Trema Flavonoid 4CL low borderline
POO00983.1[Trema Flavonoid 4CL low borderline
POO01150.1[Trema Flavonoid 4CL medium pass
POO01739.1[Trema Flavonoid 4CL medium pass
POO01740.1[Trema Flavonoid 4CL medium pass
POO02222.1[Trema Flavonoid 4CL low borderline
POO03236.1[Trema Flavonoid 4CL medium pass
PON49513.1[Trema Flavonoid ANR low borderline
PON55947.1[Trema Flavonoid ANR medium borderline
PON56203.1[Trema Flavonoid ANR low borderline
PON57526.1[Trema Flavonoid ANR medium borderline
PON57529.1[Trema Flavonoid ANR medium borderline
PON57532.1[Trema Flavonoid ANR medium borderline
PON58670.1[Trema Flavonoid ANR medium borderline
PON58671.1[Trema Flavonoid ANR medium borderline
PON58672.1[Trema Flavonoid ANR medium borderline