PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
PON50129.1[Trema Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
PON50133.1[Trema Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
PON51936.1[Trema Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
PON53412.1[Trema Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
PON54689.1[Trema Alkaloid GES low borderline GES__00009__sp_Q8GUE4_GERS_CINTE
PON54690.1[Trema Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
PON55952.1[Trema Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
PON55954.1[Trema Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
PON64823.1[Trema Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
PON67638.1[Trema Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
PON75441.1[Trema Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
PON82650.1[Trema Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
PON82652.1[Trema Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
PON82654.1[Trema Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
PON82655.1[Trema Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
PON82658.1[Trema Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
PON84203.1[Trema Alkaloid GES medium pass GES__00011__sp_R9QMR5_ATERP_PINBN
PON84631.1[Trema Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
PON85950.1[Trema Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
PON90199.1[Trema Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
PON90389.1[Trema Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
PON94472.1[Trema Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
PON94473.1[Trema Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
PON95189.1[Trema Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
PON95190.1[Trema Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
PON95191.1[Trema Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
PON98843.1[Trema Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
POO03632.1[Trema Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH