PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
PON31981.1[Trema Alkaloid G8O/G8H low borderline
PON31982.1[Trema Alkaloid G8O/G8H medium borderline
PON33270.1[Trema Alkaloid G8O/G8H medium borderline
PON33951.1[Trema Alkaloid G8O/G8H medium borderline
PON35477.1[Trema Alkaloid G8O/G8H medium borderline
PON37123.1[Trema Alkaloid G8O/G8H medium borderline
PON37804.1[Trema Alkaloid G8O/G8H medium borderline
PON37805.1[Trema Alkaloid G8O/G8H low borderline
PON45550.1[Trema Alkaloid G8O/G8H low borderline
PON46385.1[Trema Alkaloid G8O/G8H medium borderline
PON46459.1[Trema Alkaloid G8O/G8H low borderline
PON46880.1[Trema Alkaloid G8O/G8H medium borderline
PON46893.1[Trema Alkaloid G8O/G8H low borderline
PON46896.1[Trema Alkaloid G8O/G8H medium borderline
PON59361.1[Trema Alkaloid G8O/G8H medium borderline
PON62658.1[Trema Alkaloid G8O/G8H medium borderline
PON62661.1[Trema Alkaloid G8O/G8H medium borderline
PON64559.1[Trema Alkaloid G8O/G8H medium borderline
PON66668.1[Trema Alkaloid G8O/G8H low borderline
PON66670.1[Trema Alkaloid G8O/G8H medium borderline
PON74641.1[Trema Alkaloid G8O/G8H medium borderline
PON82034.1[Trema Alkaloid G8O/G8H medium borderline
PON83064.1[Trema Alkaloid G8O/G8H medium borderline
PON83455.1[Trema Alkaloid G8O/G8H medium borderline
PON84715.1[Trema Alkaloid G8O/G8H medium borderline
PON85217.1[Trema Alkaloid G8O/G8H medium borderline
PON85219.1[Trema Alkaloid G8O/G8H medium borderline
PON86074.1[Trema Alkaloid G8O/G8H medium borderline
PON88615.1[Trema Alkaloid G8O/G8H medium borderline
PON88617.1[Trema Alkaloid G8O/G8H medium borderline
PON90268.1[Trema Alkaloid G8O/G8H medium borderline
PON91641.1[Trema Alkaloid G8O/G8H medium pass
PON92820.1[Trema Alkaloid G8O/G8H medium borderline
PON92926.1[Trema Alkaloid G8O/G8H low borderline
PON92930.1[Trema Alkaloid G8O/G8H medium borderline
PON93625.1[Trema Alkaloid G8O/G8H medium borderline
PON94059.1[Trema Alkaloid G8O/G8H medium borderline
PON99602.1[Trema Alkaloid G8O/G8H medium borderline
PON99734.1[Trema Alkaloid G8O/G8H low borderline