PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
PON31982.1[Trema Terpenoid CYP76 medium pass
PON33269.1[Trema Terpenoid CYP76 medium borderline
PON33270.1[Trema Terpenoid CYP76 medium pass
PON33731.1[Trema Terpenoid CYP76 medium borderline
PON33951.1[Trema Terpenoid CYP76 medium pass
PON35274.1[Trema Terpenoid CYP76 medium pass
PON35276.1[Trema Terpenoid CYP76 medium borderline
PON35277.1[Trema Terpenoid CYP76 low borderline
PON35477.1[Trema Terpenoid CYP76 medium pass
PON36395.1[Trema Terpenoid CYP76 medium borderline
PON36396.1[Trema Terpenoid CYP76 medium borderline
PON36810.1[Trema Terpenoid CYP76 medium borderline
PON37123.1[Trema Terpenoid CYP76 medium pass
PON37804.1[Trema Terpenoid CYP76 medium pass
PON37806.1[Trema Terpenoid CYP76 medium borderline
PON37807.1[Trema Terpenoid CYP76 medium borderline
PON40931.1[Trema Terpenoid CYP76 medium borderline
PON44277.1[Trema Terpenoid CYP76 low borderline
PON44998.1[Trema Terpenoid CYP76 low borderline
PON45552.1[Trema Terpenoid CYP76 low borderline
PON46237.1[Trema Terpenoid CYP76 medium pass
PON46238.1[Trema Terpenoid CYP76 medium borderline
PON46379.1[Trema Terpenoid CYP76 medium pass
PON46380.1[Trema Terpenoid CYP76 low borderline
PON46381.1[Trema Terpenoid CYP76 medium borderline
PON46382.1[Trema Terpenoid CYP76 medium borderline
PON46383.1[Trema Terpenoid CYP76 medium borderline
PON46384.1[Trema Terpenoid CYP76 medium pass
PON46385.1[Trema Terpenoid CYP76 medium borderline
PON46460.1[Trema Terpenoid CYP76 low borderline
PON46880.1[Trema Terpenoid CYP76 low borderline
PON46885.1[Trema Terpenoid CYP76 medium borderline
PON46893.1[Trema Terpenoid CYP76 low borderline
PON46894.1[Trema Terpenoid CYP76 medium borderline
PON46896.1[Trema Terpenoid CYP76 medium borderline
PON48322.1[Trema Terpenoid CYP76 low borderline
PON48515.1[Trema Terpenoid CYP76 medium borderline
PON49486.1[Trema Terpenoid CYP76 medium pass
PON49923.1[Trema Terpenoid CYP76 medium borderline
PON50217.1[Trema Terpenoid CYP76 medium pass
PON50717.1[Trema Terpenoid CYP76 medium pass
PON52976.1[Trema Terpenoid CYP76 medium pass
PON53032.1[Trema Terpenoid CYP76 low borderline
PON53414.1[Trema Terpenoid CYP76 medium borderline
PON53603.1[Trema Terpenoid CYP76 medium pass
PON57809.1[Trema Terpenoid CYP76 medium pass
PON59223.1[Trema Terpenoid CYP76 medium pass
PON59360.1[Trema Terpenoid CYP76 medium pass
PON59361.1[Trema Terpenoid CYP76 medium pass
PON59364.1[Trema Terpenoid CYP76 medium pass