PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
Reset
Gene Pathway Family Confidence Status
PON84715.1[Trema Steroid DWF4/CYP90B1 low borderline
PON84718.1[Trema Steroid DWF4/CYP90B1 low borderline
PON85216.1[Trema Steroid DWF4/CYP90B1 medium borderline
PON85218.1[Trema Steroid DWF4/CYP90B1 medium borderline
PON85225.1[Trema Steroid DWF4/CYP90B1 low borderline
PON86074.1[Trema Steroid DWF4/CYP90B1 medium borderline
PON86474.1[Trema Steroid DWF4/CYP90B1 low borderline
PON87526.1[Trema Steroid DWF4/CYP90B1 medium borderline
PON87934.1[Trema Steroid DWF4/CYP90B1 low borderline
PON88008.1[Trema Steroid DWF4/CYP90B1 medium borderline
PON89627.1[Trema Steroid DWF4/CYP90B1 low borderline
PON90369.1[Trema Steroid DWF4/CYP90B1 low borderline
PON90373.1[Trema Steroid DWF4/CYP90B1 low borderline
PON90374.1[Trema Steroid DWF4/CYP90B1 low borderline
PON90375.1[Trema Steroid DWF4/CYP90B1 low borderline
PON90662.1[Trema Steroid DWF4/CYP90B1 low borderline
PON90666.1[Trema Steroid DWF4/CYP90B1 medium borderline
PON90852.1[Trema Steroid DWF4/CYP90B1 low borderline
PON90853.1[Trema Steroid DWF4/CYP90B1 low borderline
PON91057.1[Trema Steroid DWF4/CYP90B1 low borderline
PON92920.1[Trema Steroid DWF4/CYP90B1 low borderline
PON92921.1[Trema Steroid DWF4/CYP90B1 low borderline
PON92927.1[Trema Steroid DWF4/CYP90B1 low borderline
PON92930.1[Trema Steroid DWF4/CYP90B1 medium borderline
PON94055.1[Trema Steroid DWF4/CYP90B1 medium borderline
PON94060.1[Trema Steroid DWF4/CYP90B1 low borderline
PON94061.1[Trema Steroid DWF4/CYP90B1 low borderline
PON94191.1[Trema Steroid DWF4/CYP90B1 medium borderline
PON94774.1[Trema Steroid DWF4/CYP90B1 medium borderline
PON95368.1[Trema Steroid DWF4/CYP90B1 low borderline
PON96011.1[Trema Steroid DWF4/CYP90B1 low borderline
PON96764.1[Trema Steroid DWF4/CYP90B1 low borderline
PON96765.1[Trema Steroid DWF4/CYP90B1 low borderline
PON96766.1[Trema Steroid DWF4/CYP90B1 low borderline
PON96770.1[Trema Steroid DWF4/CYP90B1 low borderline
PON96772.1[Trema Steroid DWF4/CYP90B1 low borderline
PON97293.1[Trema Steroid DWF4/CYP90B1 low borderline
PON98578.1[Trema Steroid DWF4/CYP90B1 low borderline
PON98583.1[Trema Steroid DWF4/CYP90B1 low borderline
PON98587.1[Trema Steroid DWF4/CYP90B1 low borderline
PON99134.1[Trema Steroid DWF4/CYP90B1 low borderline
PON99136.1[Trema Steroid DWF4/CYP90B1 low borderline
PON99137.1[Trema Steroid DWF4/CYP90B1 low borderline
PON99152.1[Trema Steroid DWF4/CYP90B1 low borderline
PON99602.1[Trema Steroid DWF4/CYP90B1 medium borderline
POO01868.1[Trema Steroid DWF4/CYP90B1 low borderline
POO01969.1[Trema Steroid DWF4/CYP90B1 low borderline
POO03023.1[Trema Steroid DWF4/CYP90B1 low borderline
POO03024.1[Trema Steroid DWF4/CYP90B1 medium borderline
POO03420.1[Trema Steroid DWF4/CYP90B1 low borderline