PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
PON83294.1[Trema Flavonoid F3H low borderline
PON83351.1[Trema Flavonoid F3H medium borderline
PON83685.1[Trema Flavonoid F3H medium borderline
PON83979.1[Trema Flavonoid F3H medium borderline
PON84193.1[Trema Flavonoid F3H medium borderline
PON84482.1[Trema Flavonoid F3H medium borderline
PON84992.1[Trema Flavonoid F3H medium borderline
PON84995.1[Trema Flavonoid F3H medium borderline
PON84996.1[Trema Flavonoid F3H medium borderline
PON84997.1[Trema Flavonoid F3H medium borderline
PON85165.1[Trema Flavonoid F3H medium borderline
PON85340.1[Trema Flavonoid F3H medium borderline
PON85458.1[Trema Flavonoid F3H medium borderline
PON86470.1[Trema Flavonoid F3H medium borderline
PON86593.1[Trema Flavonoid F3H medium borderline
PON87335.1[Trema Flavonoid F3H medium borderline
PON87340.1[Trema Flavonoid F3H medium borderline
PON87342.1[Trema Flavonoid F3H medium borderline
PON87690.1[Trema Flavonoid F3H medium borderline
PON88065.1[Trema Flavonoid F3H medium borderline
PON88066.1[Trema Flavonoid F3H medium borderline
PON88295.1[Trema Flavonoid F3H medium borderline
PON89431.1[Trema Flavonoid F3H low borderline
PON89432.1[Trema Flavonoid F3H low borderline
PON89434.1[Trema Flavonoid F3H low borderline
PON89435.1[Trema Flavonoid F3H low borderline
PON89436.1[Trema Flavonoid F3H low borderline
PON89437.1[Trema Flavonoid F3H low borderline
PON89440.1[Trema Flavonoid F3H low borderline
PON89441.1[Trema Flavonoid F3H low borderline
PON89442.1[Trema Flavonoid F3H medium borderline
PON89626.1[Trema Flavonoid F3H medium borderline
PON89648.1[Trema Flavonoid F3H medium borderline
PON90057.1[Trema Flavonoid F3H medium borderline
PON90240.1[Trema Flavonoid F3H low borderline
PON90836.1[Trema Flavonoid F3H medium borderline
PON90837.1[Trema Flavonoid F3H medium borderline
PON91277.1[Trema Flavonoid F3H medium borderline
PON91314.1[Trema Flavonoid F3H medium borderline
PON91551.1[Trema Flavonoid F3H medium borderline
PON92241.1[Trema Flavonoid F3H medium borderline
PON92444.1[Trema Flavonoid F3H medium pass
PON93622.1[Trema Flavonoid F3H low borderline
PON93623.1[Trema Flavonoid F3H low borderline
PON95083.1[Trema Flavonoid F3H medium borderline
PON95085.1[Trema Flavonoid F3H medium borderline
PON95087.1[Trema Flavonoid F3H medium borderline
PON95090.1[Trema Flavonoid F3H medium borderline
PON95091.1[Trema Flavonoid F3H medium borderline
PON95844.1[Trema Flavonoid F3H low borderline