PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status Best Target
PON89340.1[Trema Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PON89341.1[Trema Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PON91445.1[Trema Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
PON92357.1[Trema Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PON92371.1[Trema Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PON92372.1[Trema Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PON92578.1[Trema Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PON92584.1[Trema Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PON92586.1[Trema Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PON92587.1[Trema Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PON92588.1[Trema Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PON92589.1[Trema Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
PON92593.1[Trema Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PON93392.1[Trema Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PON94765.1[Trema Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PON94766.1[Trema Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PON95416.1[Trema Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
PON95724.1[Trema Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
PON97356.1[Trema Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
POO00197.1[Trema Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
POO00199.1[Trema Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
POO00490.1[Trema Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
POO03026.1[Trema Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
POO03392.1[Trema Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
POO03396.1[Trema Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH