PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
PON84721.1[Trema Flavonoid UFGT medium pass
PON84722.1[Trema Flavonoid UFGT medium pass
PON84724.1[Trema Flavonoid UFGT high pass
PON84725.1[Trema Flavonoid UFGT high pass
PON85859.1[Trema Flavonoid UFGT medium pass
PON85863.1[Trema Flavonoid UFGT medium pass
PON85864.1[Trema Flavonoid UFGT high pass
PON85866.1[Trema Flavonoid UFGT medium pass
PON86713.1[Trema Flavonoid UFGT high pass
PON86714.1[Trema Flavonoid UFGT medium pass
PON86715.1[Trema Flavonoid UFGT high pass
PON86717.1[Trema Flavonoid UFGT high pass
PON87598.1[Trema Flavonoid UFGT medium pass
PON87600.1[Trema Flavonoid UFGT high pass
PON87603.1[Trema Flavonoid UFGT high pass
PON87604.1[Trema Flavonoid UFGT medium pass
PON87607.1[Trema Flavonoid UFGT high pass
PON87609.1[Trema Flavonoid UFGT medium pass
PON87611.1[Trema Flavonoid UFGT medium pass
PON88038.1[Trema Flavonoid UFGT high pass
PON88085.1[Trema Flavonoid UFGT medium pass
PON88087.1[Trema Flavonoid UFGT high pass
PON88088.1[Trema Flavonoid UFGT medium pass
PON88089.1[Trema Flavonoid UFGT medium pass
PON88091.1[Trema Flavonoid UFGT high pass
PON88092.1[Trema Flavonoid UFGT medium pass
PON88094.1[Trema Flavonoid UFGT medium pass
PON88097.1[Trema Flavonoid UFGT medium pass
PON89238.1[Trema Flavonoid UFGT high pass
PON89240.1[Trema Flavonoid UFGT medium pass
PON89833.1[Trema Flavonoid UFGT high pass
PON89834.1[Trema Flavonoid UFGT high pass
PON89962.1[Trema Flavonoid UFGT medium pass
PON90344.1[Trema Flavonoid UFGT medium pass
PON90345.1[Trema Flavonoid UFGT medium pass
PON90349.1[Trema Flavonoid UFGT medium pass
PON90352.1[Trema Flavonoid UFGT medium pass
PON90922.1[Trema Flavonoid UFGT high pass
PON90932.1[Trema Flavonoid UFGT medium pass
PON90934.1[Trema Flavonoid UFGT medium pass
PON91313.1[Trema Flavonoid UFGT low borderline
PON92776.1[Trema Flavonoid UFGT medium pass
PON92777.1[Trema Flavonoid UFGT high pass
PON94065.1[Trema Flavonoid UFGT medium pass
PON94695.1[Trema Flavonoid UFGT medium pass
PON94697.1[Trema Flavonoid UFGT medium pass
PON95494.1[Trema Flavonoid UFGT high pass
PON95495.1[Trema Flavonoid UFGT high pass
PON95497.1[Trema Flavonoid UFGT medium pass
PON95499.1[Trema Flavonoid UFGT high pass