PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
PON41968.1[Trema Phenylpropanoid 4CL low borderline
PON42056.1[Trema Phenylpropanoid 4CL low borderline
PON44718.1[Trema Phenylpropanoid 4CL medium pass
PON44719.1[Trema Phenylpropanoid 4CL low borderline
PON50514.1[Trema Phenylpropanoid 4CL low borderline
PON54984.1[Trema Phenylpropanoid 4CL medium pass
PON59855.1[Trema Phenylpropanoid 4CL low borderline
PON62423.1[Trema Phenylpropanoid 4CL medium pass
PON67159.1[Trema Phenylpropanoid 4CL medium pass
PON68279.1[Trema Phenylpropanoid 4CL medium pass
PON70491.1[Trema Phenylpropanoid 4CL medium pass
PON71776.1[Trema Phenylpropanoid 4CL medium pass
PON72199.1[Trema Phenylpropanoid 4CL medium pass
PON82710.1[Trema Phenylpropanoid 4CL medium pass
PON82715.1[Trema Phenylpropanoid 4CL medium pass
PON82716.1[Trema Phenylpropanoid 4CL medium pass
PON82803.1[Trema Phenylpropanoid 4CL medium pass
PON83587.1[Trema Phenylpropanoid 4CL low borderline
PON85319.1[Trema Phenylpropanoid 4CL medium pass
PON86270.1[Trema Phenylpropanoid 4CL medium pass
PON86421.1[Trema Phenylpropanoid 4CL medium pass
PON87982.1[Trema Phenylpropanoid 4CL low borderline
PON88404.1[Trema Phenylpropanoid 4CL low borderline
PON90428.1[Trema Phenylpropanoid 4CL medium pass
PON90453.1[Trema Phenylpropanoid 4CL medium pass
PON93226.1[Trema Phenylpropanoid 4CL medium pass
PON94724.1[Trema Phenylpropanoid 4CL medium pass
PON95302.1[Trema Phenylpropanoid 4CL medium pass
PON95488.1[Trema Phenylpropanoid 4CL low borderline
PON97928.1[Trema Phenylpropanoid 4CL medium pass
PON98295.1[Trema Phenylpropanoid 4CL medium pass
PON98296.1[Trema Phenylpropanoid 4CL medium pass
PON98298.1[Trema Phenylpropanoid 4CL medium pass
PON98606.1[Trema Phenylpropanoid 4CL medium pass
POO00119.1[Trema Phenylpropanoid 4CL low borderline
POO00983.1[Trema Phenylpropanoid 4CL low borderline
POO01150.1[Trema Phenylpropanoid 4CL medium pass
POO01739.1[Trema Phenylpropanoid 4CL medium pass
POO01740.1[Trema Phenylpropanoid 4CL medium pass
POO02222.1[Trema Phenylpropanoid 4CL low borderline
POO03236.1[Trema Phenylpropanoid 4CL medium pass
PON31982.1[Trema Phenylpropanoid C3'H/CYP98A medium borderline
PON33269.1[Trema Phenylpropanoid C3'H/CYP98A medium borderline
PON33731.1[Trema Phenylpropanoid C3'H/CYP98A medium borderline
PON33950.1[Trema Phenylpropanoid C3'H/CYP98A medium borderline
PON35276.1[Trema Phenylpropanoid C3'H/CYP98A medium borderline
PON35477.1[Trema Phenylpropanoid C3'H/CYP98A low borderline
PON36395.1[Trema Phenylpropanoid C3'H/CYP98A medium borderline
PON36396.1[Trema Phenylpropanoid C3'H/CYP98A medium borderline
PON36405.1[Trema Phenylpropanoid C3'H/CYP98A low borderline