PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

2047
Candidate Protein Records
1868
Pathway-Level Records
4373
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PON39271.1[Trema Alkaloid LAMT medium borderline
PON50405.1[Trema Alkaloid LAMT low borderline
PON68105.1[Trema Alkaloid LAMT medium borderline
PON68107.1[Trema Alkaloid LAMT medium borderline
PON71038.1[Trema Alkaloid LAMT medium borderline
PON77376.1[Trema Alkaloid LAMT medium borderline
PON79141.1[Trema Alkaloid LAMT medium pass
PON82296.1[Trema Alkaloid LAMT medium borderline
PON82299.1[Trema Alkaloid LAMT medium borderline
PON82300.1[Trema Alkaloid LAMT medium borderline
PON82301.1[Trema Alkaloid LAMT medium borderline
PON82303.1[Trema Alkaloid LAMT medium borderline
PON83200.1[Trema Alkaloid LAMT low borderline
PON85683.1[Trema Alkaloid LAMT medium borderline
PON85700.1[Trema Alkaloid LAMT medium borderline
PON85701.1[Trema Alkaloid LAMT medium borderline
PON85702.1[Trema Alkaloid LAMT medium borderline
PON86878.1[Trema Alkaloid LAMT medium borderline
PON92610.1[Trema Alkaloid LAMT low borderline
PON94170.1[Trema Alkaloid LAMT medium borderline
PON98208.1[Trema Alkaloid LAMT medium borderline
PON98213.1[Trema Alkaloid LAMT medium borderline
PON99598.1[Trema Alkaloid LAMT medium borderline
PON99609.1[Trema Alkaloid LAMT medium borderline
PON92917.1[Trema Alkaloid MPO low borderline
PON92918.1[Trema Alkaloid MPO medium pass
PON92919.1[Trema Alkaloid MPO medium pass
PON96717.1[Trema Alkaloid MPO high pass
PON99028.1[Trema Alkaloid MPO high pass
POO02190.1[Trema Alkaloid MPO medium pass
POO02200.1[Trema Alkaloid MPO medium pass
POO02202.1[Trema Alkaloid MPO high pass
POO02203.1[Trema Alkaloid MPO medium pass
PON32197.1[Trema Alkaloid NCS medium borderline
PON40961.1[Trema Alkaloid NCS medium borderline
PON43191.1[Trema Alkaloid NCS medium borderline
PON43380.1[Trema Alkaloid NCS medium borderline
PON43382.1[Trema Alkaloid NCS medium borderline
PON43384.1[Trema Alkaloid NCS medium borderline
PON43385.1[Trema Alkaloid NCS medium borderline
PON48908.1[Trema Alkaloid NCS low borderline
PON49519.1[Trema Alkaloid NCS medium pass
PON49520.1[Trema Alkaloid NCS medium pass
PON49521.1[Trema Alkaloid NCS medium pass
PON61012.1[Trema Alkaloid NCS medium borderline
PON61013.1[Trema Alkaloid NCS medium borderline
PON69473.1[Trema Alkaloid NCS medium borderline
PON83979.1[Trema Alkaloid NCS medium borderline
PON84991.1[Trema Alkaloid NCS medium borderline
PON86174.1[Trema Alkaloid NCS low borderline