PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
PON50573.1[Trema Alkaloid 7DLGT low borderline
PON50574.1[Trema Alkaloid 7DLGT medium pass
PON52021.1[Trema Alkaloid 7DLGT medium pass
PON52022.1[Trema Alkaloid 7DLGT low borderline
PON52023.1[Trema Alkaloid 7DLGT low borderline
PON52027.1[Trema Alkaloid 7DLGT medium pass
PON53524.1[Trema Alkaloid 7DLGT low borderline
PON53999.1[Trema Alkaloid 7DLGT medium pass
PON54001.1[Trema Alkaloid 7DLGT medium pass
PON54006.1[Trema Alkaloid 7DLGT low borderline
PON54009.1[Trema Alkaloid 7DLGT medium pass
PON57031.1[Trema Alkaloid 7DLGT low borderline
PON57032.1[Trema Alkaloid 7DLGT low borderline
PON57034.1[Trema Alkaloid 7DLGT low borderline
PON57035.1[Trema Alkaloid 7DLGT low borderline
PON57113.1[Trema Alkaloid 7DLGT low borderline
PON58075.1[Trema Alkaloid 7DLGT medium pass
PON58079.1[Trema Alkaloid 7DLGT low borderline
PON58080.1[Trema Alkaloid 7DLGT low borderline
PON59350.1[Trema Alkaloid 7DLGT low borderline
PON60731.1[Trema Alkaloid 7DLGT medium pass
PON61508.1[Trema Alkaloid 7DLGT low borderline
PON62437.1[Trema Alkaloid 7DLGT low borderline
PON62438.1[Trema Alkaloid 7DLGT low borderline
PON65922.1[Trema Alkaloid 7DLGT low borderline
PON65923.1[Trema Alkaloid 7DLGT low borderline
PON65924.1[Trema Alkaloid 7DLGT medium pass
PON67175.1[Trema Alkaloid 7DLGT medium pass
PON67176.1[Trema Alkaloid 7DLGT low borderline
PON67781.1[Trema Alkaloid 7DLGT low borderline
PON70228.1[Trema Alkaloid 7DLGT low borderline
PON70230.1[Trema Alkaloid 7DLGT medium pass
PON70231.1[Trema Alkaloid 7DLGT low borderline
PON75275.1[Trema Alkaloid 7DLGT low borderline
PON75283.1[Trema Alkaloid 7DLGT low borderline
PON75971.1[Trema Alkaloid 7DLGT medium pass
PON76744.1[Trema Alkaloid 7DLGT medium pass
PON76746.1[Trema Alkaloid 7DLGT low borderline
PON77624.1[Trema Alkaloid 7DLGT low borderline
PON77823.1[Trema Alkaloid 7DLGT medium pass
PON77830.1[Trema Alkaloid 7DLGT medium pass
PON80941.1[Trema Alkaloid 7DLGT medium pass
PON80943.1[Trema Alkaloid 7DLGT high pass
PON80945.1[Trema Alkaloid 7DLGT high pass
PON81076.1[Trema Alkaloid 7DLGT low borderline
PON81078.1[Trema Alkaloid 7DLGT low borderline
PON81183.1[Trema Alkaloid 7DLGT medium pass
PON81184.1[Trema Alkaloid 7DLGT medium pass
PON81185.1[Trema Alkaloid 7DLGT high pass
PON81187.1[Trema Alkaloid 7DLGT high pass