PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
PON87931.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON87936.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON87938.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON88614.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON88617.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON90265.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON90382.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON91442.1[Trema Steroid BR6OX2/CYP85A2 medium borderline
PON91642.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON92100.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON92492.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON92802.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON92820.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON92928.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON92929.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON93293.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON93625.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON94054.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON94058.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON94068.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON94071.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON94073.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON94732.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON95046.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON96758.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON96767.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON96774.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON97218.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON97251.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON97252.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON97253.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON97254.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON97256.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON97259.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON97261.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON97559.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON98577.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON99143.1[Trema Steroid BR6OX2/CYP85A2 low borderline
PON99149.1[Trema Steroid BR6OX2/CYP85A2 low borderline
POO01981.1[Trema Steroid BR6OX2/CYP85A2 low borderline
POO03203.1[Trema Steroid BR6OX2/CYP85A2 low borderline
POO03299.1[Trema Steroid BR6OX2/CYP85A2 medium borderline
PON40447.1[Trema Steroid CAS medium pass
PON40448.1[Trema Steroid CAS medium pass
PON40994.1[Trema Steroid CAS medium pass
PON40995.1[Trema Steroid CAS medium pass
PON50129.1[Trema Steroid CAS low borderline
PON50133.1[Trema Steroid CAS medium pass
PON52397.1[Trema Steroid CAS medium pass
PON53412.1[Trema Steroid CAS medium pass