PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
PON85221.1[Trema Steroid CYP90D1 low borderline
PON86075.1[Trema Steroid CYP90D1 medium borderline
PON86617.1[Trema Steroid CYP90D1 medium borderline
PON89551.1[Trema Steroid CYP90D1 low borderline
PON89553.1[Trema Steroid CYP90D1 low borderline
PON91640.1[Trema Steroid CYP90D1 low borderline
PON91644.1[Trema Steroid CYP90D1 low borderline
PON92922.1[Trema Steroid CYP90D1 low borderline
PON94057.1[Trema Steroid CYP90D1 low borderline
PON94069.1[Trema Steroid CYP90D1 low borderline
PON94075.1[Trema Steroid CYP90D1 low borderline
PON94076.1[Trema Steroid CYP90D1 low borderline
PON96135.1[Trema Steroid CYP90D1 medium borderline
PON99151.1[Trema Steroid CYP90D1 low borderline
PON99735.1[Trema Steroid CYP90D1 low borderline
PON99770.1[Trema Steroid CYP90D1 low borderline
POO00374.1[Trema Steroid CYP90D1 medium borderline
POO00378.1[Trema Steroid CYP90D1 medium borderline
POO00380.1[Trema Steroid CYP90D1 medium borderline
POO01869.1[Trema Steroid CYP90D1 low borderline
POO02544.1[Trema Steroid CYP90D1 medium borderline
POO02655.1[Trema Steroid CYP90D1 low borderline
POO03137.1[Trema Steroid CYP90D1 low borderline
PON63717.1[Trema Steroid DET2 low borderline
PON82543.1[Trema Steroid DET2 low borderline
PON82544.1[Trema Steroid DET2 low borderline
PON88720.1[Trema Steroid DET2 low borderline
PON90143.1[Trema Steroid DET2 medium pass
PON90144.1[Trema Steroid DET2 medium pass
PON90154.1[Trema Steroid DET2 medium pass
PON90156.1[Trema Steroid DET2 medium pass
PON99939.1[Trema Steroid DET2 low borderline
PON43981.1[Trema Steroid DWF1 medium pass
PON31982.1[Trema Steroid DWF4/CYP90B1 low borderline
PON33950.1[Trema Steroid DWF4/CYP90B1 low borderline
PON37804.1[Trema Steroid DWF4/CYP90B1 low borderline
PON37806.1[Trema Steroid DWF4/CYP90B1 low borderline
PON40903.1[Trema Steroid DWF4/CYP90B1 low borderline
PON41239.1[Trema Steroid DWF4/CYP90B1 low borderline
PON41241.1[Trema Steroid DWF4/CYP90B1 low borderline
PON41242.1[Trema Steroid DWF4/CYP90B1 low borderline
PON41243.1[Trema Steroid DWF4/CYP90B1 low borderline
PON41244.1[Trema Steroid DWF4/CYP90B1 low borderline
PON43841.1[Trema Steroid DWF4/CYP90B1 low borderline
PON44277.1[Trema Steroid DWF4/CYP90B1 low borderline
PON46238.1[Trema Steroid DWF4/CYP90B1 low borderline
PON46379.1[Trema Steroid DWF4/CYP90B1 low borderline
PON46380.1[Trema Steroid DWF4/CYP90B1 low borderline
PON46382.1[Trema Steroid DWF4/CYP90B1 low borderline
PON46383.1[Trema Steroid DWF4/CYP90B1 low borderline