PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
POO01087.1[Trema Alkaloid BBE medium borderline
POO01089.1[Trema Alkaloid BBE medium borderline
POO01091.1[Trema Alkaloid BBE medium borderline
POO01094.1[Trema Alkaloid BBE medium borderline
POO01096.1[Trema Alkaloid BBE medium borderline
POO01097.1[Trema Alkaloid BBE medium borderline
POO01098.1[Trema Alkaloid BBE medium borderline
POO01099.1[Trema Alkaloid BBE medium borderline
POO01102.1[Trema Alkaloid BBE medium borderline
POO01103.1[Trema Alkaloid BBE medium borderline
POO01104.1[Trema Alkaloid BBE medium borderline
POO01108.1[Trema Alkaloid BBE medium borderline
POO01110.1[Trema Alkaloid BBE medium borderline
POO02409.1[Trema Alkaloid BBE low borderline
POO03602.1[Trema Alkaloid BBE medium borderline
PON43645.1[Trema Alkaloid CNMT low borderline
PON50355.1[Trema Alkaloid CNMT low borderline
PON64679.1[Trema Alkaloid CNMT low borderline
PON92255.1[Trema Alkaloid CNMT low borderline
PON94819.1[Trema Alkaloid CNMT medium pass
PON94820.1[Trema Alkaloid CNMT medium pass
PON95978.1[Trema Alkaloid CNMT medium borderline
PON96522.1[Trema Alkaloid CNMT low borderline
PON97467.1[Trema Alkaloid CNMT low borderline
PON99000.1[Trema Alkaloid CNMT low borderline
POO00868.1[Trema Alkaloid CNMT low borderline
POO03510.1[Trema Alkaloid CNMT low borderline
PON40958.1[Trema Alkaloid CODM/T6ODM medium borderline
PON40959.1[Trema Alkaloid CODM/T6ODM low borderline
PON40960.1[Trema Alkaloid CODM/T6ODM medium borderline
PON40963.1[Trema Alkaloid CODM/T6ODM medium borderline
PON40964.1[Trema Alkaloid CODM/T6ODM medium borderline
PON41205.1[Trema Alkaloid CODM/T6ODM medium borderline
PON45455.1[Trema Alkaloid CODM/T6ODM medium borderline
PON46287.1[Trema Alkaloid CODM/T6ODM medium borderline
PON49110.1[Trema Alkaloid CODM/T6ODM medium borderline
PON55419.1[Trema Alkaloid CODM/T6ODM medium borderline
PON57518.1[Trema Alkaloid CODM/T6ODM medium borderline
PON58796.1[Trema Alkaloid CODM/T6ODM medium borderline
PON61009.1[Trema Alkaloid CODM/T6ODM medium borderline
PON61011.1[Trema Alkaloid CODM/T6ODM medium borderline
PON64063.1[Trema Alkaloid CODM/T6ODM medium borderline
PON66642.1[Trema Alkaloid CODM/T6ODM medium borderline
PON66647.1[Trema Alkaloid CODM/T6ODM medium borderline
PON66649.1[Trema Alkaloid CODM/T6ODM medium borderline
PON66651.1[Trema Alkaloid CODM/T6ODM medium borderline
PON66652.1[Trema Alkaloid CODM/T6ODM medium borderline
PON66654.1[Trema Alkaloid CODM/T6ODM medium borderline
PON71390.1[Trema Alkaloid CODM/T6ODM medium borderline
PON73476.1[Trema Alkaloid CODM/T6ODM medium borderline