PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

2047
Candidate Protein Records
1868
Pathway-Level Records
4373
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
PON86470.1[Trema Flavonoid F3H medium borderline
PON86593.1[Trema Flavonoid F3H medium borderline
PON87335.1[Trema Flavonoid F3H medium borderline
PON87340.1[Trema Flavonoid F3H medium borderline
PON87342.1[Trema Flavonoid F3H medium borderline
PON87690.1[Trema Flavonoid F3H medium borderline
PON88065.1[Trema Flavonoid F3H medium borderline
PON88066.1[Trema Flavonoid F3H medium borderline
PON88295.1[Trema Flavonoid F3H medium borderline
PON89431.1[Trema Flavonoid F3H low borderline
PON89432.1[Trema Flavonoid F3H low borderline
PON89434.1[Trema Flavonoid F3H low borderline
PON89435.1[Trema Flavonoid F3H low borderline
PON89436.1[Trema Flavonoid F3H low borderline
PON89437.1[Trema Flavonoid F3H low borderline
PON89440.1[Trema Flavonoid F3H low borderline
PON89441.1[Trema Flavonoid F3H low borderline
PON89442.1[Trema Flavonoid F3H medium borderline
PON89626.1[Trema Flavonoid F3H medium borderline
PON89648.1[Trema Flavonoid F3H medium borderline
PON90057.1[Trema Flavonoid F3H medium borderline
PON90240.1[Trema Flavonoid F3H low borderline
PON90836.1[Trema Flavonoid F3H medium borderline
PON90837.1[Trema Flavonoid F3H medium borderline
PON91277.1[Trema Flavonoid F3H medium borderline
PON91314.1[Trema Flavonoid F3H medium borderline
PON91551.1[Trema Flavonoid F3H medium borderline
PON92241.1[Trema Flavonoid F3H medium borderline
PON92444.1[Trema Flavonoid F3H medium pass
PON93622.1[Trema Flavonoid F3H low borderline
PON93623.1[Trema Flavonoid F3H low borderline
PON95083.1[Trema Flavonoid F3H medium borderline
PON95085.1[Trema Flavonoid F3H medium borderline
PON95087.1[Trema Flavonoid F3H medium borderline
PON95090.1[Trema Flavonoid F3H medium borderline
PON95091.1[Trema Flavonoid F3H medium borderline
PON95844.1[Trema Flavonoid F3H low borderline
PON97192.1[Trema Flavonoid F3H medium borderline
PON97484.1[Trema Flavonoid F3H low borderline
PON97716.1[Trema Flavonoid F3H medium pass
PON97883.1[Trema Flavonoid F3H medium borderline
PON98562.1[Trema Flavonoid F3H medium borderline
PON99051.1[Trema Flavonoid F3H low borderline
PON99462.1[Trema Flavonoid F3H medium borderline
PON99732.1[Trema Flavonoid F3H medium borderline
PON99733.1[Trema Flavonoid F3H medium pass
PON99737.1[Trema Flavonoid F3H medium borderline
POO00447.1[Trema Flavonoid F3H medium borderline
POO00830.1[Trema Flavonoid F3H low borderline
POO01322.1[Trema Flavonoid F3H medium borderline