PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
Reset
Protein/Isoform Record Pathway Family Confidence Status
Tpra03G0013000.1 Flavonoid C4H low borderline
Tpra04G0030720.1 Flavonoid C4H medium borderline
Tpra06G0008820.1 Flavonoid C4H medium pass
Tpra07G0008100.1 Flavonoid C4H low borderline
Tpra07G0016580.1 Flavonoid C4H medium borderline
TpraFKJA01000367.10032140.1 Flavonoid C4H medium borderline
TpraFKJA01000943.10083110.1 Flavonoid C4H low borderline
TpraFKJA01001248.10096390.1 Flavonoid C4H low borderline
TpraFKJA01005166.10123820.1 Flavonoid C4H low borderline
TpraFKJA01009463.10136710.1 Flavonoid C4H medium borderline
TpraFKJA01011997.10143220.1 Flavonoid C4H medium pass
TpraFKJA01015286.10150510.1 Flavonoid C4H low borderline
TpraFKJA01028948.10172290.1 Flavonoid C4H medium pass
TpraFKJA01033925.10178240.1 Flavonoid C4H medium borderline
TpraFKJA01035245.10179820.1 Flavonoid C4H low borderline
Tpra01G0001280.1 Rosmarinic Acid C4H medium pass
Tpra01G0001630.1 Rosmarinic Acid C4H low borderline
Tpra01G0001640.1 Rosmarinic Acid C4H low borderline
Tpra01G0001660.1 Rosmarinic Acid C4H low borderline
Tpra01G0010430.1 Rosmarinic Acid C4H low borderline
Tpra01G0013880.1 Rosmarinic Acid C4H medium pass
Tpra01G0015010.1 Rosmarinic Acid C4H low borderline
Tpra01G0015540.1 Rosmarinic Acid C4H low borderline
Tpra01G0015920.1 Rosmarinic Acid C4H low borderline
Tpra01G0015930.1 Rosmarinic Acid C4H medium pass
Tpra01G0015940.1 Rosmarinic Acid C4H medium pass
Tpra01G0015950.1 Rosmarinic Acid C4H low borderline
Tpra01G0015960.1 Rosmarinic Acid C4H low borderline
Tpra01G0016410.1 Rosmarinic Acid C4H low borderline
Tpra01G0016830.1 Rosmarinic Acid C4H low borderline
Tpra01G0018220.1 Rosmarinic Acid C4H low borderline
Tpra01G0018220.2 Rosmarinic Acid C4H low borderline
Tpra01G0018230.1 Rosmarinic Acid C4H low borderline
Tpra01G0018240.1 Rosmarinic Acid C4H low borderline
Tpra01G0018250.1 Rosmarinic Acid C4H low borderline
Tpra01G0018260.1 Rosmarinic Acid C4H low borderline
Tpra01G0018270.1 Rosmarinic Acid C4H low borderline
Tpra01G0018280.1 Rosmarinic Acid C4H low borderline
Tpra01G0018290.1 Rosmarinic Acid C4H low borderline
Tpra01G0018300.1 Rosmarinic Acid C4H low borderline
Tpra01G0018310.1 Rosmarinic Acid C4H medium pass
Tpra01G0018320.1 Rosmarinic Acid C4H medium pass
Tpra01G0018330.1 Rosmarinic Acid C4H low borderline
Tpra01G0018340.1 Rosmarinic Acid C4H medium pass
Tpra01G0018350.1 Rosmarinic Acid C4H low borderline
Tpra01G0018370.1 Rosmarinic Acid C4H low borderline
Tpra01G0018380.1 Rosmarinic Acid C4H low borderline
Tpra01G0018390.1 Rosmarinic Acid C4H low borderline
Tpra01G0018400.1 Rosmarinic Acid C4H low borderline
Tpra01G0018420.1 Rosmarinic Acid C4H low borderline