PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Protein/Isoform Record Pathway Family Confidence Status
TpraFKJA01000883.10079840.1 Phenylpropanoid CAD low borderline
TpraFKJA01001036.10088160.1 Phenylpropanoid CAD low borderline
TpraFKJA01001107.10091530.1 Phenylpropanoid CAD medium pass
TpraFKJA01001107.10091540.1 Phenylpropanoid CAD medium pass
TpraFKJA01001107.10091550.1 Phenylpropanoid CAD medium pass
TpraFKJA01001670.10104820.1 Phenylpropanoid CAD medium borderline
TpraFKJA01001885.10107190.1 Phenylpropanoid CAD low borderline
TpraFKJA01002261.10110300.1 Phenylpropanoid CAD low borderline
TpraFKJA01005242.10124120.1 Phenylpropanoid CAD medium pass
TpraFKJA01008274.10133560.1 Phenylpropanoid CAD medium borderline
TpraFKJA01010482.10139360.1 Phenylpropanoid CAD low borderline
TpraFKJA01012351.10144130.1 Phenylpropanoid CAD medium borderline
TpraFKJA01014746.10149400.1 Phenylpropanoid CAD medium pass
TpraFKJA01023746.10164870.1 Phenylpropanoid CAD medium pass
TpraFKJA01028025.10171020.1 Phenylpropanoid CAD medium pass
TpraFKJA01031039.10175040.1 Phenylpropanoid CAD medium borderline
TpraFKJA01032832.10176990.1 Phenylpropanoid CAD medium pass
TpraFKJA01035279.10179880.1 Phenylpropanoid CAD medium borderline