PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Tpra05G0000800.1 Alkaloid COR medium pass
Tpra05G0003570.1 Alkaloid COR medium pass
Tpra07G0028450.1 Alkaloid COR low borderline
TpraFKJA01000091.10002550.1 Alkaloid COR medium pass
TpraFKJA01000381.10034210.1 Alkaloid COR medium pass
TpraFKJA01000381.10034220.1 Alkaloid COR medium pass
TpraFKJA01000478.10044310.1 Alkaloid COR low borderline
TpraFKJA01000560.10052880.1 Alkaloid COR low borderline
TpraFKJA01000567.10053590.1 Alkaloid COR low borderline
TpraFKJA01000585.10055380.1 Alkaloid COR medium pass
TpraFKJA01000585.10055390.1 Alkaloid COR medium pass
TpraFKJA01000672.10063480.1 Alkaloid COR medium pass
TpraFKJA01001046.10088600.1 Alkaloid COR medium pass
TpraFKJA01001046.10088620.1 Alkaloid COR medium pass
TpraFKJA01001053.10089050.1 Alkaloid COR medium pass
TpraFKJA01001053.10089080.1 Alkaloid COR low borderline
TpraFKJA01001177.10094130.1 Alkaloid COR medium pass
TpraFKJA01002570.10112540.1 Alkaloid COR medium pass
TpraFKJA01002752.10113660.1 Alkaloid COR medium pass
TpraFKJA01026492.10168840.1 Alkaloid COR medium pass
Tpra02G0005610.1 Alkaloid CYP719 low borderline
Tpra02G0012660.1 Alkaloid CYP719 medium borderline
Tpra02G0017890.1 Alkaloid CYP719 medium borderline
Tpra03G0011890.1 Alkaloid CYP719 medium borderline
Tpra03G0025000.1 Alkaloid CYP719 medium borderline
Tpra04G0002410.1 Alkaloid CYP719 medium borderline
Tpra04G0005900.1 Alkaloid CYP719 medium borderline
Tpra05G0012890.1 Alkaloid CYP719 medium borderline
TpraFKJA01000274.10021750.1 Alkaloid CYP719 medium borderline
TpraFKJA01000286.10023300.1 Alkaloid CYP719 low borderline
TpraFKJA01000292.10023960.1 Alkaloid CYP719 medium borderline
TpraFKJA01000292.10023990.1 Alkaloid CYP719 medium borderline
TpraFKJA01000332.10028560.1 Alkaloid CYP719 medium borderline
TpraFKJA01000895.10080490.1 Alkaloid CYP719 medium borderline
Tpra02G0000810.1 Alkaloid CYP80B1 medium borderline
Tpra02G0000820.1 Alkaloid CYP80B1 low borderline
Tpra03G0017780.1 Alkaloid CYP80B1 low borderline
Tpra03G0024930.1 Alkaloid CYP80B1 medium borderline
Tpra03G0033580.1 Alkaloid CYP80B1 medium borderline
TpraFKJA01007491.10131320.1 Alkaloid CYP80B1 medium borderline
TpraFKJA01026164.10168360.1 Alkaloid CYP80B1 medium borderline
Tpra01G0001640.1 Alkaloid G8O/G8H medium borderline
Tpra01G0001650.1 Alkaloid G8O/G8H medium borderline
Tpra01G0001660.1 Alkaloid G8O/G8H medium borderline
Tpra01G0015960.1 Alkaloid G8O/G8H medium borderline
Tpra01G0018310.1 Alkaloid G8O/G8H medium borderline
Tpra01G0018330.1 Alkaloid G8O/G8H medium borderline
Tpra01G0018350.1 Alkaloid G8O/G8H medium borderline
Tpra01G0022660.1 Alkaloid G8O/G8H medium borderline
Tpra01G0026160.1 Alkaloid G8O/G8H medium borderline