PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Tpra01G0028190.1 Alkaloid G8O/G8H medium borderline
Tpra01G0031290.1 Alkaloid G8O/G8H low borderline
Tpra01G0031330.1 Alkaloid G8O/G8H medium borderline
Tpra02G0001760.1 Alkaloid G8O/G8H medium borderline
Tpra02G0006240.1 Alkaloid G8O/G8H medium borderline
Tpra02G0012540.1 Alkaloid G8O/G8H medium borderline
Tpra02G0021170.1 Alkaloid G8O/G8H medium borderline
Tpra02G0023100.1 Alkaloid G8O/G8H low borderline
Tpra02G0032840.1 Alkaloid G8O/G8H medium borderline
Tpra02G0032880.1 Alkaloid G8O/G8H medium borderline
Tpra02G0032890.1 Alkaloid G8O/G8H medium borderline
Tpra02G0032910.1 Alkaloid G8O/G8H medium borderline
Tpra03G0004960.1 Alkaloid G8O/G8H medium borderline
Tpra03G0013000.1 Alkaloid G8O/G8H low borderline
Tpra03G0021940.1 Alkaloid G8O/G8H medium borderline
Tpra03G0023670.1 Alkaloid G8O/G8H medium pass
Tpra03G0033560.1 Alkaloid G8O/G8H medium pass
Tpra04G0012440.1 Alkaloid G8O/G8H low borderline
Tpra04G0030750.1 Alkaloid G8O/G8H medium borderline
Tpra05G0006900.1 Alkaloid G8O/G8H medium pass
Tpra06G0000100.1 Alkaloid G8O/G8H medium borderline
Tpra06G0008820.1 Alkaloid G8O/G8H medium borderline
Tpra06G0015990.1 Alkaloid G8O/G8H medium borderline
Tpra06G0017100.1 Alkaloid G8O/G8H medium borderline
Tpra06G0021790.1 Alkaloid G8O/G8H medium pass
Tpra06G0024630.1 Alkaloid G8O/G8H medium pass
Tpra06G0026150.1 Alkaloid G8O/G8H medium pass
Tpra07G0010350.1 Alkaloid G8O/G8H medium borderline
Tpra07G0023080.1 Alkaloid G8O/G8H medium borderline
Tpra07G0029000.1 Alkaloid G8O/G8H medium borderline
Tpra07G0031860.1 Alkaloid G8O/G8H low borderline
TpraFKJA01000242.10018270.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01000269.10021220.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01000284.10023050.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01000286.10023080.1 Alkaloid G8O/G8H low borderline
TpraFKJA01000310.10026310.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01000310.10026320.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01000415.10037170.1 Alkaloid G8O/G8H low borderline
TpraFKJA01000415.10037180.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01000643.10060900.1 Alkaloid G8O/G8H medium pass
TpraFKJA01000684.10064680.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01000686.10064800.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01000686.10064810.1 Alkaloid G8O/G8H medium pass
TpraFKJA01000725.10067800.1 Alkaloid G8O/G8H low borderline
TpraFKJA01000754.10070230.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01000812.10074730.1 Alkaloid G8O/G8H low borderline
TpraFKJA01000890.10080210.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01000956.10083760.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01001017.10087110.1 Alkaloid G8O/G8H medium borderline
TpraFKJA01001831.10106650.1 Alkaloid G8O/G8H medium borderline