PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
TpraFKJA01021499.10161490.1 Terpenoid CYP76 medium pass
TpraFKJA01023528.10164490.1 Terpenoid CYP76 medium pass
TpraFKJA01023676.10164770.1 Terpenoid CYP76 medium pass
TpraFKJA01025380.10167170.1 Terpenoid CYP76 low borderline
TpraFKJA01026164.10168360.1 Terpenoid CYP76 medium borderline
TpraFKJA01027031.10169670.1 Terpenoid CYP76 medium pass
TpraFKJA01028112.10171160.1 Terpenoid CYP76 medium pass
TpraFKJA01028948.10172290.1 Terpenoid CYP76 medium pass
TpraFKJA01029118.10172560.1 Terpenoid CYP76 low borderline
TpraFKJA01030517.10174360.1 Terpenoid CYP76 medium pass
TpraFKJA01033925.10178240.1 Terpenoid CYP76 medium pass
TpraFKJA01035253.10179850.1 Terpenoid CYP76 medium borderline
TpraFKJA01039706.10184540.1 Terpenoid CYP76 medium borderline
Tpra05G0007520.1 Terpenoid DXR high pass
TpraFKJA01000737.10068850.1 Terpenoid DXR high pass
Tpra01G0003340.1 Terpenoid DXS low borderline
Tpra01G0003350.1 Terpenoid DXS low borderline
Tpra03G0013260.1 Terpenoid DXS medium pass
Tpra04G0028900.1 Terpenoid DXS low borderline
Tpra05G0015520.1 Terpenoid DXS medium pass
TpraFKJA01000491.10045450.1 Terpenoid DXS low borderline
TpraFKJA01000600.10057550.1 Terpenoid DXS medium pass
TpraFKJA01001044.10088570.1 Terpenoid DXS medium pass
TpraFKJA01001300.10097940.1 Terpenoid DXS medium pass
Tpra04G0001010.1 Terpenoid FPPS medium borderline
Tpra04G0001180.1 Terpenoid FPPS medium borderline
Tpra04G0019500.1 Terpenoid FPPS low borderline
Tpra04G0019500.2 Terpenoid FPPS low borderline
Tpra06G0018480.1 Terpenoid FPPS medium pass
TpraFKJA01000231.10016670.1 Terpenoid FPPS medium pass
TpraFKJA01000236.10017470.1 Terpenoid FPPS medium pass
TpraFKJA01001704.10105180.1 Terpenoid FPPS medium pass
TpraFKJA01003217.10116010.1 Terpenoid FPPS medium pass
TpraFKJA01008852.10135090.1 Terpenoid FPPS low borderline
TpraFKJA01022187.10162460.1 Terpenoid FPPS medium pass
Tpra02G0002830.1 Terpenoid GGPPS medium borderline
Tpra03G0028880.1 Terpenoid GGPPS medium borderline
Tpra04G0023140.1 Terpenoid GGPPS medium borderline
Tpra07G0010270.1 Terpenoid GGPPS medium borderline
Tpra07G0028120.1 Terpenoid GGPPS medium borderline
Tpra04G0002700.1 Terpenoid HDR/IspH low borderline
TpraFKJA01000260.10019820.1 Terpenoid HDR/IspH medium pass
TpraFKJA01000871.10079040.1 Terpenoid HDR/IspH high pass
Tpra07G0017730.1 Terpenoid HDS/IspG high pass
Tpra01G0030020.1 Terpenoid HMGR low borderline
Tpra02G0018840.1 Terpenoid HMGR medium pass
Tpra02G0021480.1 Terpenoid HMGR medium pass
Tpra03G0031960.1 Terpenoid HMGR medium pass
Tpra03G0031970.1 Terpenoid HMGR medium pass
Tpra03G0031980.1 Terpenoid HMGR medium pass