PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Tpra04G0006580.1 Terpenoid HMGR medium pass
Tpra04G0007420.1 Terpenoid HMGR medium pass
Tpra04G0007500.1 Terpenoid HMGR medium pass
Tpra04G0028840.1 Terpenoid HMGR medium pass
Tpra05G0008000.1 Terpenoid HMGR medium pass
Tpra07G0003790.1 Terpenoid HMGR medium pass
Tpra07G0020070.1 Terpenoid HMGR medium pass
Tpra02G0035360.1 Terpenoid HMGS high pass
TpraFKJA01000385.10034670.1 Terpenoid HMGS high pass
TpraFKJA01000452.10041350.1 Terpenoid IDI medium pass
TpraFKJA01000715.10066960.1 Terpenoid IDI medium pass
Tpra02G0023640.1 Terpenoid MCT/IspD high pass
Tpra03G0008490.1 Terpenoid MCT/IspD low borderline
Tpra03G0014130.1 Terpenoid MCT/IspD low borderline
Tpra05G0014340.1 Terpenoid MCT/IspD low borderline
Tpra02G0034710.1 Terpenoid MDS/IspF high pass
Tpra01G0000140.1 Terpenoid MVD low borderline
Tpra01G0000190.1 Terpenoid MVD medium pass
Tpra07G0024650.1 Terpenoid MVD low borderline
Tpra07G0024650.2 Terpenoid MVD low borderline
TpraFKJA01001007.10086460.1 Terpenoid MVD low borderline
TpraFKJA01002082.10109000.1 Terpenoid MVD low borderline
Tpra03G0028820.1 Terpenoid MVK low borderline
Tpra04G0000130.1 Terpenoid MVK low borderline
Tpra04G0016520.1 Terpenoid MVK low borderline
Tpra06G0008210.1 Terpenoid MVK medium pass
Tpra06G0008230.1 Terpenoid MVK medium pass
TpraFKJA01002102.10109140.1 Terpenoid MVK low borderline
Tpra02G0009570.1 Terpenoid PMK medium pass
Tpra01G0018360.1 Terpenoid TPS low borderline
Tpra02G0007750.1 Terpenoid TPS medium pass
Tpra02G0024640.1 Terpenoid TPS low borderline
Tpra02G0033190.1 Terpenoid TPS medium pass
Tpra03G0013900.1 Terpenoid TPS medium pass
Tpra03G0013910.1 Terpenoid TPS medium pass
Tpra03G0013920.1 Terpenoid TPS medium pass
Tpra03G0026230.1 Terpenoid TPS medium pass
Tpra03G0031510.1 Terpenoid TPS medium pass
Tpra04G0017080.1 Terpenoid TPS medium pass
Tpra04G0020010.1 Terpenoid TPS medium pass
Tpra04G0020020.1 Terpenoid TPS low borderline
Tpra04G0020150.1 Terpenoid TPS medium pass
Tpra04G0021320.1 Terpenoid TPS medium pass
Tpra06G0009300.1 Terpenoid TPS medium pass
Tpra06G0009310.1 Terpenoid TPS medium pass
Tpra06G0013370.1 Terpenoid TPS medium pass
Tpra06G0013380.1 Terpenoid TPS medium pass
Tpra07G0027250.1 Terpenoid TPS medium pass
Tpra07G0030860.1 Terpenoid TPS low borderline
Tpra07G0030880.1 Terpenoid TPS medium pass