PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
TpraFKJA01000358.10031310.1 Alkaloid H6H low borderline
TpraFKJA01000448.10040560.1 Alkaloid H6H high pass
TpraFKJA01000448.10040570.1 Alkaloid H6H medium borderline
TpraFKJA01000659.10062440.1 Alkaloid H6H low borderline
TpraFKJA01000711.10066680.1 Alkaloid H6H low borderline
TpraFKJA01000720.10067540.1 Alkaloid H6H low borderline
TpraFKJA01000726.10067970.1 Alkaloid H6H medium borderline
TpraFKJA01000742.10069160.1 Alkaloid H6H medium borderline
TpraFKJA01000742.10069170.1 Alkaloid H6H low borderline
TpraFKJA01000753.10070150.1 Alkaloid H6H medium pass
TpraFKJA01000957.10083810.1 Alkaloid H6H low borderline
TpraFKJA01000958.10083930.1 Alkaloid H6H low borderline
TpraFKJA01001165.10093670.1 Alkaloid H6H low borderline
TpraFKJA01001343.10099060.1 Alkaloid H6H low borderline
TpraFKJA01001630.10104330.1 Alkaloid H6H medium pass
TpraFKJA01001931.10107660.1 Alkaloid H6H low borderline
TpraFKJA01004716.10122270.1 Alkaloid H6H medium pass
TpraFKJA01011340.10141540.1 Alkaloid H6H medium borderline
TpraFKJA01011952.10143110.1 Alkaloid H6H medium borderline
TpraFKJA01014881.10149710.1 Alkaloid H6H low borderline
TpraFKJA01027277.10170000.1 Alkaloid H6H medium borderline
TpraFKJA01033552.10177710.1 Alkaloid H6H low borderline
TpraFKJA01034619.10179160.1 Alkaloid H6H medium borderline
Tpra01G0013880.1 Alkaloid IO medium borderline
Tpra01G0019910.1 Alkaloid IO medium borderline
Tpra01G0028370.1 Alkaloid IO low borderline
Tpra01G0031310.1 Alkaloid IO medium borderline
Tpra02G0034300.1 Alkaloid IO low borderline
Tpra03G0011540.1 Alkaloid IO medium borderline
Tpra03G0024920.1 Alkaloid IO medium pass
Tpra03G0024940.1 Alkaloid IO medium borderline
Tpra04G0012430.1 Alkaloid IO medium borderline
Tpra06G0024650.1 Alkaloid IO medium borderline
Tpra06G0026160.1 Alkaloid IO medium borderline
Tpra07G0009530.1 Alkaloid IO medium borderline
Tpra07G0012170.1 Alkaloid IO low borderline
Tpra07G0025070.1 Alkaloid IO medium borderline
Tpra07G0031850.1 Alkaloid IO medium borderline
TpraFKJA01000286.10023260.1 Alkaloid IO low borderline
TpraFKJA01000337.10029280.1 Alkaloid IO medium borderline
TpraFKJA01000572.10053820.1 Alkaloid IO low borderline
TpraFKJA01000621.10059310.1 Alkaloid IO medium borderline
TpraFKJA01000744.10069380.1 Alkaloid IO medium borderline
TpraFKJA01000812.10074740.1 Alkaloid IO medium borderline
TpraFKJA01000820.10075440.1 Alkaloid IO low borderline
TpraFKJA01000995.10085880.1 Alkaloid IO medium borderline
TpraFKJA01003781.10118600.1 Alkaloid IO low borderline
TpraFKJA01003783.10118610.1 Alkaloid IO medium borderline
TpraFKJA01006980.10129860.1 Alkaloid IO medium borderline
TpraFKJA01008554.10134310.1 Alkaloid IO medium borderline