PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
TpraFKJA01010915.10140520.1 Alkaloid IO medium borderline
TpraFKJA01036441.10181120.1 Alkaloid IO medium pass
Tpra01G0016400.1 Alkaloid ISY low borderline
Tpra01G0024710.1 Alkaloid ISY medium pass
Tpra01G0024720.1 Alkaloid ISY medium pass
Tpra03G0030320.1 Alkaloid ISY medium pass
Tpra04G0014000.1 Alkaloid ISY medium pass
Tpra07G0018760.1 Alkaloid ISY medium pass
Tpra07G0018770.1 Alkaloid ISY medium pass
Tpra07G0018780.1 Alkaloid ISY medium pass
Tpra07G0018790.1 Alkaloid ISY medium pass
TpraFKJA01026104.10168260.1 Alkaloid ISY medium pass
TpraFKJA01037224.10181990.1 Alkaloid ISY medium pass
Tpra01G0007640.1 Alkaloid LAMT medium borderline
Tpra03G0031230.1 Alkaloid LAMT medium borderline
Tpra06G0010760.1 Alkaloid LAMT medium borderline
Tpra07G0004150.1 Alkaloid LAMT medium borderline
TpraFKJA01000321.10026860.1 Alkaloid LAMT medium borderline
TpraFKJA01000331.10028290.1 Alkaloid LAMT medium borderline
TpraFKJA01000408.10036360.1 Alkaloid LAMT medium borderline
TpraFKJA01000658.10062390.1 Alkaloid LAMT medium borderline
TpraFKJA01000985.10085310.1 Alkaloid LAMT medium borderline
TpraFKJA01000985.10085350.1 Alkaloid LAMT medium borderline
TpraFKJA01002689.10113230.1 Alkaloid LAMT medium borderline
TpraFKJA01016458.10152840.1 Alkaloid LAMT medium borderline
Tpra01G0001800.1 Alkaloid MPO medium pass
Tpra01G0001840.1 Alkaloid MPO low borderline
Tpra02G0004370.1 Alkaloid MPO low borderline
Tpra04G0001520.1 Alkaloid MPO medium pass
Tpra04G0027140.1 Alkaloid MPO high pass
Tpra07G0014000.1 Alkaloid MPO medium pass
TpraFKJA01000232.10017080.1 Alkaloid MPO low borderline
TpraFKJA01000614.10058700.1 Alkaloid MPO medium pass
TpraFKJA01000614.10058700.2 Alkaloid MPO medium pass
TpraFKJA01000772.10072020.1 Alkaloid MPO medium pass
TpraFKJA01001012.10086850.1 Alkaloid MPO medium pass
TpraFKJA01001012.10086850.2 Alkaloid MPO medium pass
TpraFKJA01001452.10101510.1 Alkaloid MPO medium pass
TpraFKJA01009084.10135690.1 Alkaloid MPO medium pass
TpraFKJA01030846.10174830.1 Alkaloid MPO low borderline
Tpra01G0010700.1 Alkaloid NCS medium borderline
Tpra02G0003810.1 Alkaloid NCS medium borderline
Tpra02G0024790.1 Alkaloid NCS medium borderline
Tpra02G0033300.1 Alkaloid NCS medium borderline
Tpra03G0001360.1 Alkaloid NCS medium borderline
Tpra03G0029780.1 Alkaloid NCS medium borderline
Tpra05G0001650.1 Alkaloid NCS medium pass
Tpra05G0002470.1 Alkaloid NCS medium borderline
Tpra07G0008420.1 Alkaloid NCS medium borderline
Tpra07G0023100.1 Alkaloid NCS medium borderline