PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
TpraFKJA01000605.10058060.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000618.10058990.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000618.10059010.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000621.10059310.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000686.10064800.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000744.10069380.1 Steroid BR6OX2/CYP85A2 medium borderline
TpraFKJA01000777.10072560.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000890.10080190.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000895.10080480.1 Steroid BR6OX2/CYP85A2 medium borderline
TpraFKJA01000895.10080500.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000956.10083740.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000956.10083750.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000969.10084540.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000990.10085650.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000995.10085870.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01000995.10085880.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01002072.10108930.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01002853.10114090.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01002947.10114540.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01004638.10121870.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01005166.10123820.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01005444.10124810.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01008650.10134520.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01010252.10138820.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01012206.10143770.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01013166.10146150.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01014880.10149700.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01019460.10158140.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01019758.10158680.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01020446.10159890.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01021015.10160720.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01021499.10161490.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01022756.10163240.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01023528.10164490.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01029118.10172560.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01035253.10179850.1 Steroid BR6OX2/CYP85A2 low borderline
TpraFKJA01038124.10182820.1 Steroid BR6OX2/CYP85A2 low borderline
Tpra01G0001670.1 Steroid CAS medium pass
Tpra01G0011710.1 Steroid CAS medium pass
Tpra01G0018350.1 Steroid CAS low borderline
Tpra02G0000200.1 Steroid CAS medium pass
Tpra02G0000230.1 Steroid CAS medium pass
Tpra02G0001840.1 Steroid CAS medium pass
Tpra02G0002480.1 Steroid CAS medium pass
Tpra02G0007750.1 Steroid CAS low borderline
Tpra02G0021630.1 Steroid CAS medium pass
Tpra02G0036790.1 Steroid CAS medium pass
Tpra02G0036790.2 Steroid CAS medium pass
Tpra03G0013900.1 Steroid CAS medium pass
Tpra03G0013920.1 Steroid CAS medium pass