PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Tpra03G0031510.1 Steroid CAS low borderline
Tpra04G0000490.1 Steroid CAS medium pass
Tpra04G0017080.1 Steroid CAS medium pass
Tpra04G0019080.1 Steroid CAS medium pass
Tpra04G0019100.1 Steroid CAS medium pass
Tpra04G0020020.1 Steroid CAS low borderline
Tpra04G0020150.1 Steroid CAS low borderline
Tpra04G0021320.1 Steroid CAS medium pass
Tpra04G0027910.1 Steroid CAS medium pass
Tpra05G0001360.1 Steroid CAS medium pass
Tpra05G0001370.1 Steroid CAS medium pass
Tpra06G0013370.1 Steroid CAS medium pass
Tpra06G0013380.1 Steroid CAS medium pass
Tpra06G0022460.1 Steroid CAS low borderline
Tpra06G0022470.1 Steroid CAS medium pass
Tpra07G0005880.1 Steroid CAS medium pass
Tpra07G0005890.1 Steroid CAS medium pass
Tpra07G0005910.1 Steroid CAS medium pass
Tpra07G0008090.1 Steroid CAS medium pass
Tpra07G0027250.1 Steroid CAS medium pass
Tpra07G0030880.1 Steroid CAS low borderline
TpraFKJA01000299.10024390.1 Steroid CAS medium pass
TpraFKJA01000358.10031330.1 Steroid CAS low borderline
TpraFKJA01000358.10031350.1 Steroid CAS medium pass
TpraFKJA01000358.10031360.1 Steroid CAS medium pass
TpraFKJA01000358.10031370.1 Steroid CAS medium pass
TpraFKJA01000359.10031490.1 Steroid CAS medium pass
TpraFKJA01000459.10041800.1 Steroid CAS medium pass
TpraFKJA01000459.10041810.1 Steroid CAS medium pass
TpraFKJA01000459.10041830.1 Steroid CAS medium pass
TpraFKJA01000459.10041840.1 Steroid CAS medium pass
TpraFKJA01000476.10044060.1 Steroid CAS low borderline
TpraFKJA01000476.10044070.1 Steroid CAS low borderline
TpraFKJA01000720.10067380.1 Steroid CAS low borderline
TpraFKJA01000832.10076070.1 Steroid CAS medium pass
TpraFKJA01001036.10088160.1 Steroid CAS medium pass
TpraFKJA01001079.10090270.1 Steroid CAS medium pass
TpraFKJA01001079.10090300.1 Steroid CAS medium pass
TpraFKJA01001421.10100940.1 Steroid CAS medium pass
TpraFKJA01002178.10109660.1 Steroid CAS medium pass
TpraFKJA01004774.10122510.1 Steroid CAS low borderline
TpraFKJA01027309.10170050.1 Steroid CAS medium pass
TpraFKJA01029125.10172590.1 Steroid CAS medium pass
TpraFKJA01032832.10176990.1 Steroid CAS medium pass
Tpra01G0004230.1 Steroid CPD/CYP90A1 medium borderline
Tpra01G0019070.1 Steroid CPD/CYP90A1 low borderline
Tpra02G0001760.1 Steroid CPD/CYP90A1 medium borderline
Tpra02G0004660.1 Steroid CPD/CYP90A1 medium borderline
Tpra02G0020410.1 Steroid CPD/CYP90A1 low borderline
Tpra02G0032910.1 Steroid CPD/CYP90A1 low borderline