PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2106
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Tpra02G0035060.1 Steroid CPD/CYP90A1 low borderline
Tpra03G0004980.1 Steroid CPD/CYP90A1 medium borderline
Tpra04G0000720.1 Steroid CPD/CYP90A1 medium borderline
Tpra04G0016290.1 Steroid CPD/CYP90A1 medium borderline
Tpra06G0016740.1 Steroid CPD/CYP90A1 low borderline
Tpra06G0018090.1 Steroid CPD/CYP90A1 low borderline
TpraFKJA01000292.10023970.1 Steroid CPD/CYP90A1 medium pass
TpraFKJA01000337.10029300.1 Steroid CPD/CYP90A1 low borderline
TpraFKJA01000890.10080200.1 Steroid CPD/CYP90A1 low borderline
TpraFKJA01001727.10105460.1 Steroid CPD/CYP90A1 low borderline
TpraFKJA01001831.10106640.1 Steroid CPD/CYP90A1 medium borderline
TpraFKJA01028112.10171160.1 Steroid CPD/CYP90A1 medium borderline
Tpra05G0005320.1 Steroid CPI1 high pass
Tpra07G0012420.1 Steroid CPI1 low borderline
TpraFKJA01001549.10103280.1 Steroid CPI1 low borderline
Tpra01G0018220.1 Steroid CYP51G1 medium borderline
Tpra01G0018250.1 Steroid CYP51G1 medium borderline
Tpra01G0018300.1 Steroid CYP51G1 medium borderline
Tpra01G0018320.1 Steroid CYP51G1 medium borderline
Tpra01G0018370.1 Steroid CYP51G1 medium borderline
Tpra01G0018400.1 Steroid CYP51G1 medium borderline
Tpra01G0018430.1 Steroid CYP51G1 medium borderline
Tpra01G0022650.1 Steroid CYP51G1 medium borderline
Tpra02G0014170.1 Steroid CYP51G1 medium borderline
Tpra03G0012950.1 Steroid CYP51G1 medium borderline
Tpra03G0012960.1 Steroid CYP51G1 medium borderline
Tpra03G0012980.1 Steroid CYP51G1 medium borderline
Tpra03G0012990.1 Steroid CYP51G1 medium borderline
Tpra03G0019580.1 Steroid CYP51G1 medium borderline
Tpra03G0023640.1 Steroid CYP51G1 medium borderline
Tpra05G0004080.1 Steroid CYP51G1 medium borderline
Tpra05G0006850.1 Steroid CYP51G1 medium borderline
Tpra06G0008840.1 Steroid CYP51G1 medium borderline
Tpra06G0008850.1 Steroid CYP51G1 medium borderline
Tpra06G0009260.1 Steroid CYP51G1 medium borderline
Tpra06G0026160.1 Steroid CYP51G1 medium borderline
TpraFKJA01000186.10009610.1 Steroid CYP51G1 medium borderline
TpraFKJA01000716.10067040.1 Steroid CYP51G1 medium borderline
TpraFKJA01000911.10081430.1 Steroid CYP51G1 medium borderline
TpraFKJA01002961.10114660.1 Steroid CYP51G1 medium borderline
TpraFKJA01006174.10127420.1 Steroid CYP51G1 medium borderline
TpraFKJA01010915.10140520.1 Steroid CYP51G1 medium borderline
TpraFKJA01015930.10151900.1 Steroid CYP51G1 medium borderline
TpraFKJA01018132.10155870.1 Steroid CYP51G1 medium borderline
Tpra01G0001630.1 Steroid CYP90D1 low borderline
Tpra01G0001640.1 Steroid CYP90D1 low borderline
Tpra01G0001660.1 Steroid CYP90D1 low borderline
Tpra01G0018260.1 Steroid CYP90D1 low borderline
Tpra01G0018270.1 Steroid CYP90D1 low borderline
Tpra01G0025090.1 Steroid CYP90D1 medium borderline