PlantSME Plant secondary metabolism enzyme database

Trifolium pratense (trifolium_pratense)

Imported from atlas release summary for Trifolium pratense.

2510
Candidate Protein Records
2106
Pathway-Level Records
5331
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 575 19 UGT (209) View species results
Alkaloid pathway 505 23 7DLGT (90) View species results
Phenylpropanoid pathway 426 13 POD (188) View species results
Flavonoid pathway 317 14 UFGT (181) View species results
Rosmarinic acid pathway 171 7 C4H (77) View species results
Steroid pathway 112 14 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2157 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 340 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
TpraFKJA01000748.10069670.1 Alkaloid 8HGO medium borderline
TpraFKJA01000798.10074120.1 Alkaloid 8HGO medium borderline
TpraFKJA01002261.10110300.1 Alkaloid 8HGO medium borderline
TpraFKJA01003419.10117020.1 Alkaloid 8HGO medium borderline
TpraFKJA01008424.10133940.1 Alkaloid 8HGO medium pass
TpraFKJA01017175.10154090.1 Alkaloid 8HGO medium pass
TpraFKJA01022939.10163540.1 Alkaloid 8HGO medium pass
TpraFKJA01001997.10108220.1 Alkaloid ADC medium pass
TpraFKJA01001997.10108230.1 Alkaloid ADC medium pass
Tpra03G0013300.1 Alkaloid BBE medium borderline
Tpra03G0013300.2 Alkaloid BBE medium borderline
Tpra03G0013310.1 Alkaloid BBE medium borderline
Tpra03G0013320.1 Alkaloid BBE medium borderline
Tpra03G0013330.1 Alkaloid BBE medium borderline
Tpra03G0013340.1 Alkaloid BBE medium borderline
Tpra03G0032520.1 Alkaloid BBE medium borderline
Tpra06G0009830.1 Alkaloid BBE low borderline
Tpra06G0009830.2 Alkaloid BBE low borderline
Tpra06G0009830.3 Alkaloid BBE low borderline
TpraFKJA01000178.10007820.1 Alkaloid BBE medium borderline
TpraFKJA01000205.10012950.1 Alkaloid BBE medium borderline
TpraFKJA01000205.10012980.1 Alkaloid BBE medium borderline
TpraFKJA01000205.10012990.1 Alkaloid BBE medium borderline
TpraFKJA01000697.10065760.1 Alkaloid BBE medium borderline
TpraFKJA01000697.10065780.1 Alkaloid BBE medium borderline
TpraFKJA01001597.10103910.1 Alkaloid BBE medium borderline
TpraFKJA01005191.10123960.1 Alkaloid BBE medium borderline
TpraFKJA01009338.10136390.1 Alkaloid BBE medium borderline
TpraFKJA01021036.10160770.1 Alkaloid BBE medium borderline
TpraFKJA01037241.10182030.1 Alkaloid BBE medium borderline
Tpra02G0009560.1 Alkaloid CNMT low borderline
Tpra02G0012670.1 Alkaloid CNMT low borderline
Tpra03G0002930.1 Alkaloid CNMT low borderline
Tpra04G0002330.1 Alkaloid CNMT low borderline
Tpra04G0029230.1 Alkaloid CNMT low borderline
Tpra07G0009650.1 Alkaloid CNMT medium borderline
TpraFKJA01000685.10064730.1 Alkaloid CNMT low borderline
TpraFKJA01001022.10087270.1 Alkaloid CNMT low borderline
TpraFKJA01008594.10134410.1 Alkaloid CNMT low borderline
Tpra01G0002670.1 Alkaloid CODM/T6ODM medium borderline
Tpra01G0013660.1 Alkaloid CODM/T6ODM medium borderline
Tpra01G0015200.1 Alkaloid CODM/T6ODM low borderline
Tpra01G0015220.1 Alkaloid CODM/T6ODM medium borderline
Tpra01G0016260.1 Alkaloid CODM/T6ODM medium borderline
Tpra01G0024100.1 Alkaloid CODM/T6ODM medium borderline
Tpra02G0003440.1 Alkaloid CODM/T6ODM medium borderline
Tpra02G0019310.1 Alkaloid CODM/T6ODM medium pass
Tpra02G0019390.1 Alkaloid CODM/T6ODM medium borderline
Tpra02G0035290.1 Alkaloid CODM/T6ODM medium borderline
Tpra03G0009110.1 Alkaloid CODM/T6ODM medium borderline