PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
TRsanscaffold_70197550 Steroid BR6OX2/CYP85A2 low borderline
TRsanscaffold_80206890 Steroid BR6OX2/CYP85A2 low borderline
TRsanscaffold_90215480 Steroid BR6OX2/CYP85A2 low borderline
TRsanscaffold_90216860 Steroid BR6OX2/CYP85A2 low borderline
TRsanscaffold_100017560 Steroid CAS medium pass
TRsanscaffold_100025230 Steroid CAS medium pass
TRsanscaffold_110048470 Steroid CAS medium pass
TRsanscaffold_120051730 Steroid CAS medium pass
TRsanscaffold_20079440 Steroid CAS medium pass
TRsanscaffold_30107030 Steroid CAS medium pass
TRsanscaffold_40119250 Steroid CAS medium pass
TRsanscaffold_40134180 Steroid CAS medium pass
TRsanscaffold_40134200 Steroid CAS medium pass
TRsanscaffold_80205180 Steroid CAS medium pass
TRsanscaffold_100016110 Steroid CPD/CYP90A1 low borderline
TRsanscaffold_100020460 Steroid CPD/CYP90A1 low borderline
TRsanscaffold_10003770 Steroid CPD/CYP90A1 low borderline
TRsanscaffold_110046370 Steroid CPD/CYP90A1 low borderline
TRsanscaffold_20064030 Steroid CPD/CYP90A1 medium borderline
TRsanscaffold_20067470 Steroid CPD/CYP90A1 medium borderline
TRsanscaffold_20099470 Steroid CPD/CYP90A1 medium borderline
TRsanscaffold_40132850 Steroid CPD/CYP90A1 low borderline
TRsanscaffold_60169620 Steroid CPD/CYP90A1 medium borderline
TRsanscaffold_60171040 Steroid CPD/CYP90A1 medium borderline
TRsanscaffold_80204510 Steroid CPD/CYP90A1 low borderline
TRsanscaffold_90216840 Steroid CPD/CYP90A1 medium borderline
TRsanscaffold_60179000 Steroid CPI1 high pass
TRsanscaffold_90216490 Steroid CPI1 low borderline
TRsanscaffold_40137730 Steroid CYP51G1 medium borderline
TRsanscaffold_100014290 Steroid CYP90D1 low borderline
TRsanscaffold_100014680 Steroid CYP90D1 low borderline
TRsanscaffold_110042130 Steroid CYP90D1 low borderline
TRsanscaffold_120050520 Steroid CYP90D1 low borderline
TRsanscaffold_120051210 Steroid CYP90D1 low borderline
TRsanscaffold_20064360 Steroid CYP90D1 low borderline
TRsanscaffold_20078920 Steroid CYP90D1 low borderline
TRsanscaffold_20096860 Steroid CYP90D1 low borderline
TRsanscaffold_20097770 Steroid CYP90D1 low borderline
TRsanscaffold_20099910 Steroid CYP90D1 low borderline
TRsanscaffold_60178510 Steroid CYP90D1 low borderline
TRsanscaffold_80203270 Steroid CYP90D1 low borderline
TRsanscaffold_110045810 Steroid DET2 low borderline
TRsanscaffold_60163380 Steroid DET2 medium pass
TRsanscaffold_60163390 Steroid DET2 medium pass
TRsanscaffold_80205500 Steroid DET2 medium pass
TRsanscaffold_80210770 Steroid DET2 low borderline
TRsanscaffold_100025770 Steroid DWF1 medium pass
TRsanscaffold_20091600 Steroid DWF1 medium pass
TRsanscaffold_60171850 Steroid DWF1 low borderline
TRsanscaffold_100016120 Steroid DWF4/CYP90B1 medium borderline