PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
TRsanscaffold_10006290 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_10010000 Steroid DWF4/CYP90B1 medium borderline
TRsanscaffold_10010040 Steroid DWF4/CYP90B1 medium borderline
TRsanscaffold_110041950 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_110044680 Steroid DWF4/CYP90B1 medium borderline
TRsanscaffold_110044710 Steroid DWF4/CYP90B1 medium borderline
TRsanscaffold_110044720 Steroid DWF4/CYP90B1 medium borderline
TRsanscaffold_110045360 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_120050820 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_130055210 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_170060910 Steroid DWF4/CYP90B1 medium borderline
TRsanscaffold_20065760 Steroid DWF4/CYP90B1 medium borderline
TRsanscaffold_20065890 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_20072700 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_20073730 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_20083470 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_20092810 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_20094690 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_30115580 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_40142500 Steroid DWF4/CYP90B1 medium borderline
TRsanscaffold_40145690 Steroid DWF4/CYP90B1 medium borderline
TRsanscaffold_50154930 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_50159500 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_50160560 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_60166130 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_60178580 Steroid DWF4/CYP90B1 medium borderline
TRsanscaffold_60180580 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_60183390 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_60184280 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_80205660 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_80208880 Steroid DWF4/CYP90B1 low borderline
TRsanscaffold_120051810 Steroid DWF5 medium pass
TRsanscaffold_20074070 Steroid DWF5 low borderline
TRsanscaffold_80207800 Steroid DWF5 medium pass
TRsanscaffold_50159300 Steroid DWF7 medium pass
TRsanscaffold_60176060 Steroid FK high pass
TRsanscaffold_40144360 Steroid HYD1 low borderline
TRsanscaffold_60164850 Steroid HYD1 high pass
TRsanscaffold_60171360 Steroid HYD1 low borderline
TRsanscaffold_20082400 Steroid ROT3/CYP90C1 low borderline
TRsanscaffold_20069870 Steroid SMO1/SMO2 low borderline
TRsanscaffold_20095670 Steroid SMO1/SMO2 medium pass
TRsanscaffold_50155720 Steroid SMO1/SMO2 medium pass
TRsanscaffold_100018830 Steroid SMT1/SMT2/SMT3 medium pass
TRsanscaffold_100018960 Steroid SMT1/SMT2/SMT3 medium pass
TRsanscaffold_100024400 Steroid SMT1/SMT2/SMT3 low borderline
TRsanscaffold_100032400 Steroid SMT1/SMT2/SMT3 medium pass
TRsanscaffold_110046360 Steroid SMT1/SMT2/SMT3 low borderline
TRsanscaffold_120051530 Steroid SMT1/SMT2/SMT3 low borderline
TRsanscaffold_120054130 Steroid SMT1/SMT2/SMT3 medium pass