PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Family-Level Assignments
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
TRsanscaffold_80208440 Alkaloid G8O/G8H low borderline
TRsanscaffold_100017560 Alkaloid GES low borderline
TRsanscaffold_30107030 Alkaloid GES medium pass
TRsanscaffold_40119250 Alkaloid GES low borderline
TRsanscaffold_40134180 Alkaloid GES low borderline
TRsanscaffold_100017450 Alkaloid GS low borderline
TRsanscaffold_100018220 Alkaloid GS medium pass
TRsanscaffold_100019750 Alkaloid GS low borderline
TRsanscaffold_100024200 Alkaloid GS high pass
TRsanscaffold_10002560 Alkaloid GS high pass
TRsanscaffold_10010220 Alkaloid GS medium pass
TRsanscaffold_10011910 Alkaloid GS low borderline
TRsanscaffold_110042510 Alkaloid GS low borderline
TRsanscaffold_110045330 Alkaloid GS low borderline
TRsanscaffold_120051980 Alkaloid GS low borderline
TRsanscaffold_20064100 Alkaloid GS low borderline
TRsanscaffold_20064110 Alkaloid GS low borderline
TRsanscaffold_20076870 Alkaloid GS low borderline
TRsanscaffold_20079390 Alkaloid GS low borderline
TRsanscaffold_20081330 Alkaloid GS low borderline
TRsanscaffold_20094390 Alkaloid GS low borderline
TRsanscaffold_20097380 Alkaloid GS low borderline
TRsanscaffold_20103420 Alkaloid GS low borderline
TRsanscaffold_20103510 Alkaloid GS low borderline
TRsanscaffold_20103520 Alkaloid GS low borderline
TRsanscaffold_30110670 Alkaloid GS low borderline
TRsanscaffold_30112210 Alkaloid GS low borderline
TRsanscaffold_30115970 Alkaloid GS low borderline
TRsanscaffold_40120700 Alkaloid GS low borderline
TRsanscaffold_40127620 Alkaloid GS high pass
TRsanscaffold_40129620 Alkaloid GS high pass
TRsanscaffold_40129630 Alkaloid GS high pass
TRsanscaffold_40135050 Alkaloid GS low borderline
TRsanscaffold_40139080 Alkaloid GS high pass
TRsanscaffold_40139150 Alkaloid GS low borderline
TRsanscaffold_40144500 Alkaloid GS high pass
TRsanscaffold_40145160 Alkaloid GS medium pass
TRsanscaffold_50153070 Alkaloid GS low borderline
TRsanscaffold_50153580 Alkaloid GS low borderline
TRsanscaffold_50154830 Alkaloid GS low borderline
TRsanscaffold_50159290 Alkaloid GS low borderline
TRsanscaffold_50159750 Alkaloid GS low borderline
TRsanscaffold_60164320 Alkaloid GS low borderline
TRsanscaffold_60164330 Alkaloid GS low borderline
TRsanscaffold_60170700 Alkaloid GS low borderline
TRsanscaffold_60174210 Alkaloid GS low borderline
TRsanscaffold_60183930 Alkaloid GS low borderline
TRsanscaffold_70187230 Alkaloid GS low borderline
TRsanscaffold_70187250 Alkaloid GS low borderline
TRsanscaffold_80209800 Alkaloid GS low borderline