PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
TRsanscaffold_50159700 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_50160560 Phenylpropanoid C3'H/CYP98A high pass
TRsanscaffold_60166130 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_60169620 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_60171040 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_60173450 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_60178510 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_60178580 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_60181040 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_60181080 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_60181100 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_60181110 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_60182070 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_60183390 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_60184280 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_60185180 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_70197550 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_80203270 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_80206890 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_80208440 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_80208880 Phenylpropanoid C3'H/CYP98A low borderline
TRsanscaffold_90215480 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_90216840 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_90216860 Phenylpropanoid C3'H/CYP98A medium borderline
TRsanscaffold_120050500 Phenylpropanoid C4H/CYP73A low borderline
TRsanscaffold_20083470 Phenylpropanoid C4H/CYP73A medium borderline
TRsanscaffold_30110890 Phenylpropanoid C4H/CYP73A medium borderline
TRsanscaffold_50153870 Phenylpropanoid C4H/CYP73A low borderline
TRsanscaffold_100018220 Phenylpropanoid CAD low borderline
TRsanscaffold_100019280 Phenylpropanoid CAD low borderline
TRsanscaffold_100024200 Phenylpropanoid CAD medium pass
TRsanscaffold_10002560 Phenylpropanoid CAD medium pass
TRsanscaffold_100034450 Phenylpropanoid CAD medium borderline
TRsanscaffold_10010220 Phenylpropanoid CAD medium pass
TRsanscaffold_10011910 Phenylpropanoid CAD low borderline
TRsanscaffold_110045330 Phenylpropanoid CAD low borderline
TRsanscaffold_20069290 Phenylpropanoid CAD medium borderline
TRsanscaffold_20076870 Phenylpropanoid CAD low borderline
TRsanscaffold_20094390 Phenylpropanoid CAD low borderline
TRsanscaffold_20097430 Phenylpropanoid CAD medium borderline
TRsanscaffold_20103420 Phenylpropanoid CAD medium pass
TRsanscaffold_20103510 Phenylpropanoid CAD low borderline
TRsanscaffold_30107030 Phenylpropanoid CAD low borderline
TRsanscaffold_30110000 Phenylpropanoid CAD medium borderline
TRsanscaffold_30115970 Phenylpropanoid CAD low borderline
TRsanscaffold_40127600 Phenylpropanoid CAD low borderline
TRsanscaffold_40127620 Phenylpropanoid CAD medium pass
TRsanscaffold_40129620 Phenylpropanoid CAD medium pass
TRsanscaffold_40129630 Phenylpropanoid CAD medium pass
TRsanscaffold_40135050 Phenylpropanoid CAD low borderline