PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
TRsanscaffold_40139080 Phenylpropanoid CAD medium pass
TRsanscaffold_40144500 Phenylpropanoid CAD medium pass
TRsanscaffold_50153240 Phenylpropanoid CAD low borderline
TRsanscaffold_50154830 Phenylpropanoid CAD medium pass
TRsanscaffold_50159830 Phenylpropanoid CAD medium borderline
TRsanscaffold_50159860 Phenylpropanoid CAD medium borderline
TRsanscaffold_50159870 Phenylpropanoid CAD medium borderline
TRsanscaffold_90221750 Phenylpropanoid CAD low borderline
TRsanscaffold_110049100 Phenylpropanoid CCR medium borderline
TRsanscaffold_20082250 Phenylpropanoid CCR low borderline
TRsanscaffold_20093040 Phenylpropanoid CCR medium borderline
TRsanscaffold_30105010 Phenylpropanoid CCR low borderline
TRsanscaffold_70197850 Phenylpropanoid CCR medium borderline
TRsanscaffold_90213910 Phenylpropanoid CCR medium borderline
TRsanscaffold_20082640 Phenylpropanoid CCoAOMT medium pass
TRsanscaffold_40142300 Phenylpropanoid CCoAOMT medium pass
TRsanscaffold_80200250 Phenylpropanoid CCoAOMT medium pass
TRsanscaffold_100016070 Phenylpropanoid COMT medium pass
TRsanscaffold_10001740 Phenylpropanoid COMT low borderline
TRsanscaffold_100022830 Phenylpropanoid COMT medium pass
TRsanscaffold_100023590 Phenylpropanoid COMT low borderline
TRsanscaffold_100028580 Phenylpropanoid COMT medium pass
TRsanscaffold_100029200 Phenylpropanoid COMT medium pass
TRsanscaffold_10011690 Phenylpropanoid COMT low borderline
TRsanscaffold_110042420 Phenylpropanoid COMT medium pass
TRsanscaffold_20070770 Phenylpropanoid COMT medium pass
TRsanscaffold_40121790 Phenylpropanoid COMT low borderline
TRsanscaffold_40123800 Phenylpropanoid COMT medium pass
TRsanscaffold_40123810 Phenylpropanoid COMT medium pass
TRsanscaffold_40131950 Phenylpropanoid COMT low borderline
TRsanscaffold_40138730 Phenylpropanoid COMT medium pass
TRsanscaffold_40140320 Phenylpropanoid COMT medium pass
TRsanscaffold_60162040 Phenylpropanoid COMT medium pass
TRsanscaffold_80211200 Phenylpropanoid COMT medium pass
TRsanscaffold_10001900 Phenylpropanoid CSE medium pass
TRsanscaffold_100032410 Phenylpropanoid CSE medium pass
TRsanscaffold_100037480 Phenylpropanoid CSE medium pass
TRsanscaffold_50154790 Phenylpropanoid CSE medium pass
TRsanscaffold_60169860 Phenylpropanoid CSE medium pass
TRsanscaffold_60178050 Phenylpropanoid CSE medium pass
TRsanscaffold_90225260 Phenylpropanoid CSE medium pass
TRsanscaffold_10000040 Phenylpropanoid F5H/CYP84A low borderline
TRsanscaffold_10007260 Phenylpropanoid F5H/CYP84A medium borderline
TRsanscaffold_30108720 Phenylpropanoid F5H/CYP84A low borderline
TRsanscaffold_40121350 Phenylpropanoid F5H/CYP84A medium borderline
TRsanscaffold_40137730 Phenylpropanoid F5H/CYP84A medium borderline
TRsanscaffold_60179850 Phenylpropanoid F5H/CYP84A medium borderline
TRsanscaffold_60181130 Phenylpropanoid F5H/CYP84A medium borderline
TRsanscaffold_60185130 Phenylpropanoid F5H/CYP84A medium borderline
TRsanscaffold_60186170 Phenylpropanoid F5H/CYP84A medium borderline