PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
TRsanscaffold_70187540 Phenylpropanoid F5H/CYP84A medium borderline
TRsanscaffold_80205660 Phenylpropanoid F5H/CYP84A medium borderline
TRsanscaffold_100018390 Phenylpropanoid HCT low borderline
TRsanscaffold_100019680 Phenylpropanoid HCT medium pass
TRsanscaffold_100019990 Phenylpropanoid HCT medium pass
TRsanscaffold_100020060 Phenylpropanoid HCT medium pass
TRsanscaffold_100021130 Phenylpropanoid HCT medium pass
TRsanscaffold_100033790 Phenylpropanoid HCT low borderline
TRsanscaffold_100039320 Phenylpropanoid HCT medium pass
TRsanscaffold_120050930 Phenylpropanoid HCT low borderline
TRsanscaffold_120051100 Phenylpropanoid HCT low borderline
TRsanscaffold_20064680 Phenylpropanoid HCT low borderline
TRsanscaffold_20077090 Phenylpropanoid HCT low borderline
TRsanscaffold_20095390 Phenylpropanoid HCT medium pass
TRsanscaffold_20096500 Phenylpropanoid HCT medium pass
TRsanscaffold_20102640 Phenylpropanoid HCT low borderline
TRsanscaffold_30108910 Phenylpropanoid HCT medium pass
TRsanscaffold_40140620 Phenylpropanoid HCT medium pass
TRsanscaffold_60174070 Phenylpropanoid HCT medium pass
TRsanscaffold_60177970 Phenylpropanoid HCT medium pass
TRsanscaffold_70195440 Phenylpropanoid HCT medium pass
TRsanscaffold_80210120 Phenylpropanoid HCT low borderline
TRsanscaffold_100031920 Phenylpropanoid LAC medium pass
TRsanscaffold_100034050 Phenylpropanoid LAC medium pass
TRsanscaffold_100034940 Phenylpropanoid LAC medium pass
TRsanscaffold_100035270 Phenylpropanoid LAC medium pass
TRsanscaffold_20073770 Phenylpropanoid LAC medium pass
TRsanscaffold_20095260 Phenylpropanoid LAC low borderline
TRsanscaffold_30105510 Phenylpropanoid LAC medium pass
TRsanscaffold_40144910 Phenylpropanoid LAC low borderline
TRsanscaffold_50149480 Phenylpropanoid LAC medium pass
TRsanscaffold_90215860 Phenylpropanoid LAC low borderline
TRsanscaffold_110046900 Phenylpropanoid PAL high pass
TRsanscaffold_20099380 Phenylpropanoid PAL high pass
TRsanscaffold_40127000 Phenylpropanoid PAL high pass
TRsanscaffold_40127020 Phenylpropanoid PAL high pass
TRsanscaffold_40127030 Phenylpropanoid PAL high pass
TRsanscaffold_50158760 Phenylpropanoid PAL high pass
TRsanscaffold_90221230 Phenylpropanoid PAL low borderline
TRsanscaffold_100012620 Phenylpropanoid POD medium pass
TRsanscaffold_100014790 Phenylpropanoid POD medium pass
TRsanscaffold_100020730 Phenylpropanoid POD medium pass
TRsanscaffold_100022910 Phenylpropanoid POD medium pass
TRsanscaffold_100030700 Phenylpropanoid POD medium pass
TRsanscaffold_10003650 Phenylpropanoid POD medium pass
TRsanscaffold_100040090 Phenylpropanoid POD medium pass
TRsanscaffold_10005180 Phenylpropanoid POD medium pass
TRsanscaffold_10005300 Phenylpropanoid POD medium pass
TRsanscaffold_10008050 Phenylpropanoid POD medium pass
TRsanscaffold_110045890 Phenylpropanoid POD medium pass