PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
TRsanscaffold_20067470 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_20078200 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_20078920 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
TRsanscaffold_20082400 Terpenoid CYP76 low borderline CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI
TRsanscaffold_20083470 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_20092000 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_20092810 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_20094690 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
TRsanscaffold_20095700 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_20096860 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_20096970 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
TRsanscaffold_20096980 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
TRsanscaffold_20097010 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_20097040 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_20097050 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_20097770 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_20099910 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
TRsanscaffold_20100550 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_20100810 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
TRsanscaffold_20103230 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
TRsanscaffold_30106970 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_30106980 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_30106990 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_30107000 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_30108320 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
TRsanscaffold_30110890 Terpenoid CYP76 medium pass CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
TRsanscaffold_30110900 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_30112430 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
TRsanscaffold_30115580 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
TRsanscaffold_40121350 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_40136570 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
TRsanscaffold_40137730 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_40139540 Terpenoid CYP76 low borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_40144140 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
TRsanscaffold_50147240 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_50158430 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
TRsanscaffold_50159500 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
TRsanscaffold_50159590 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
TRsanscaffold_50159700 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_50160560 Terpenoid CYP76 medium pass CYP76__00023__sp_S4UX02_CYPH1_SALMI
TRsanscaffold_60166130 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_60171040 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_60173450 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
TRsanscaffold_60178510 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
TRsanscaffold_60179850 Terpenoid CYP76 medium pass CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
TRsanscaffold_60181020 Terpenoid CYP76 medium borderline CYP76__00017__sp_Q14T82_C76B9_PETHY
TRsanscaffold_60181040 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_60181080 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_60181100 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
TRsanscaffold_60181110 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC