PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

863
Candidate Protein Records
526
Pathway-Level Records
1651
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
TRsanscaffold_60180150 Alkaloid LAMT low borderline
TRsanscaffold_60180180 Alkaloid LAMT medium borderline
TRsanscaffold_60181540 Alkaloid LAMT medium pass
TRsanscaffold_70190170 Alkaloid LAMT medium pass
TRsanscaffold_70193370 Alkaloid LAMT medium pass
TRsanscaffold_90214130 Alkaloid LAMT low borderline
TRsanscaffold_100036080 Alkaloid MPO medium pass
TRsanscaffold_20071640 Alkaloid MPO low borderline
TRsanscaffold_20088250 Alkaloid MPO high pass
TRsanscaffold_100020020 Alkaloid NCS medium borderline
TRsanscaffold_40127220 Alkaloid NCS medium borderline
TRsanscaffold_10001170 Alkaloid NMT low borderline
TRsanscaffold_100022830 Alkaloid NMT medium pass
TRsanscaffold_100022890 Alkaloid NMT medium pass
TRsanscaffold_100023590 Alkaloid NMT medium pass
TRsanscaffold_100023990 Alkaloid NMT medium pass
TRsanscaffold_100028580 Alkaloid NMT medium borderline
TRsanscaffold_100029200 Alkaloid NMT medium pass
TRsanscaffold_100032690 Alkaloid NMT medium pass
TRsanscaffold_100038150 Alkaloid NMT medium pass
TRsanscaffold_110042420 Alkaloid NMT medium borderline
TRsanscaffold_110045250 Alkaloid NMT low borderline
TRsanscaffold_110046040 Alkaloid NMT medium pass
TRsanscaffold_110046360 Alkaloid NMT medium borderline
TRsanscaffold_110049650 Alkaloid NMT low borderline
TRsanscaffold_120054130 Alkaloid NMT medium borderline
TRsanscaffold_150057850 Alkaloid NMT medium pass
TRsanscaffold_20070770 Alkaloid NMT medium borderline
TRsanscaffold_20074070 Alkaloid NMT medium pass
TRsanscaffold_20075050 Alkaloid NMT low borderline
TRsanscaffold_20075230 Alkaloid NMT low borderline
TRsanscaffold_20075850 Alkaloid NMT medium borderline
TRsanscaffold_20080510 Alkaloid NMT low borderline
TRsanscaffold_20083160 Alkaloid NMT low borderline
TRsanscaffold_20085660 Alkaloid NMT low borderline
TRsanscaffold_20085790 Alkaloid NMT low borderline
TRsanscaffold_20090810 Alkaloid NMT medium borderline
TRsanscaffold_20102410 Alkaloid NMT medium borderline
TRsanscaffold_30112660 Alkaloid NMT medium pass
TRsanscaffold_40123800 Alkaloid NMT medium borderline
TRsanscaffold_40127570 Alkaloid NMT low borderline
TRsanscaffold_40128570 Alkaloid NMT low borderline
TRsanscaffold_40129080 Alkaloid NMT medium pass
TRsanscaffold_40129570 Alkaloid NMT medium pass
TRsanscaffold_40137800 Alkaloid NMT low borderline
TRsanscaffold_40140320 Alkaloid NMT medium borderline
TRsanscaffold_50150270 Alkaloid NMT low borderline
TRsanscaffold_50151490 Alkaloid NMT medium pass
TRsanscaffold_50155630 Alkaloid NMT low borderline
TRsanscaffold_60162040 Alkaloid NMT medium borderline