PlantSME Plant secondary metabolism enzyme database

Trocholejeunea sandvicensis (trocholejeunea_sandvicensis)

Imported from atlas release summary for Trocholejeunea sandvicensis.

526
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 144 10 POD (73) View species results
Terpenoid pathway 118 19 BAHD (52) View species results
Alkaloid pathway 115 18 NMT (19) View species results
Rosmarinic acid pathway 59 7 C4H (31) View species results
Flavonoid pathway 52 9 IFR (17) View species results
Steroid pathway 38 12 SMT1/SMT2/SMT3 (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 686 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 146 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Gene Pathway Family Confidence Status
TRsanscaffold_70191800 Terpenoid MVK low borderline
TRsanscaffold_80206820 Terpenoid PMK medium pass
TRsanscaffold_80210720 Terpenoid PMK low borderline
TRsanscaffold_100017560 Terpenoid TPS medium pass
TRsanscaffold_30107030 Terpenoid TPS medium pass
TRsanscaffold_30114610 Terpenoid TPS low borderline
TRsanscaffold_40119250 Terpenoid TPS medium pass
TRsanscaffold_40134180 Terpenoid TPS medium pass
TRsanscaffold_40134200 Terpenoid TPS medium pass
TRsanscaffold_40146140 Terpenoid TPS low borderline
TRsanscaffold_100018870 Terpenoid UGT low borderline
TRsanscaffold_20065210 Terpenoid UGT low borderline
TRsanscaffold_20065220 Terpenoid UGT medium pass
TRsanscaffold_20065900 Terpenoid UGT medium pass
TRsanscaffold_20069390 Terpenoid UGT low borderline
TRsanscaffold_20083860 Terpenoid UGT medium pass
TRsanscaffold_20101770 Terpenoid UGT low borderline
TRsanscaffold_30112830 Terpenoid UGT medium pass
TRsanscaffold_40124400 Terpenoid UGT medium pass
TRsanscaffold_50149550 Terpenoid UGT low borderline
TRsanscaffold_50156120 Terpenoid UGT low borderline
TRsanscaffold_50158310 Terpenoid UGT low borderline
TRsanscaffold_50161430 Terpenoid UGT medium pass
TRsanscaffold_60164280 Terpenoid UGT low borderline
TRsanscaffold_60176860 Terpenoid UGT low borderline
TRsanscaffold_60177850 Terpenoid UGT medium pass
TRsanscaffold_60178040 Terpenoid UGT low borderline
TRsanscaffold_60178070 Terpenoid UGT low borderline
TRsanscaffold_70188000 Terpenoid UGT low borderline
TRsanscaffold_70197170 Terpenoid UGT medium pass
TRsanscaffold_80210530 Terpenoid UGT medium pass
TRsanscaffold_90225690 Terpenoid UGT medium pass