PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

2579
Candidate Protein Records
1885
Pathway-Level Records
4430
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Aalbaalba5_s002575100674330.1 Alkaloid NMT medium borderline
Aalbaalba5_s002641700681390.1 Alkaloid NMT medium pass
Aalbaalba5_s002670030684270.1 Alkaloid NMT low borderline
Aalbaalba5_s002735940691130.1 Alkaloid NMT medium pass
Aalbaalba5_s002825850699720.1 Alkaloid NMT medium borderline
Aalbaalba5_s002894980706350.1 Alkaloid NMT medium pass
Aalbaalba5_s003012810716320.1 Alkaloid NMT medium pass
Aalbaalba5_s003033390718140.1 Alkaloid NMT medium pass
Aalbaalba5_s003052760719880.1 Alkaloid NMT medium pass
Aalbaalba5_s003067450721070.1 Alkaloid NMT medium pass
Aalbaalba5_s003095420723230.1 Alkaloid NMT medium pass
Aalbaalba5_s003209870732320.1 Alkaloid NMT medium pass
Aalbaalba5_s003282660737830.1 Alkaloid NMT medium borderline
Aalbaalba5_s003283460737880.1 Alkaloid NMT medium pass
Aalbaalba5_s003298480739280.1 Alkaloid NMT low borderline
Aalbaalba5_s003386880745390.1 Alkaloid NMT low borderline
Aalbaalba5_s003646630761940.1 Alkaloid NMT low borderline
Aalbaalba5_s003985240781790.1 Alkaloid NMT medium pass
Aalbaalba5_s004059760786060.1 Alkaloid NMT medium pass
Aalbaalba5_s004059760786060.2 Alkaloid NMT medium pass
Aalbaalba5_s004063430786280.1 Alkaloid NMT medium pass
Aalbaalba5_s004079910787290.1 Alkaloid NMT medium pass
Aalbaalba5_s004133250790230.1 Alkaloid NMT medium pass
Aalbaalba5_s004239230795990.1 Alkaloid NMT medium borderline
Aalbaalba5_s004395280803510.1 Alkaloid NMT medium pass
Aalbaalba5_s004467430806690.1 Alkaloid NMT low borderline
Aalbaalba5_s004701410816740.1 Alkaloid NMT low borderline
Aalbaalba5_s004818280821510.1 Alkaloid NMT low borderline
Aalbaalba5_s004911150825590.1 Alkaloid NMT medium borderline
Aalbaalba5_s005089620832970.1 Alkaloid NMT low borderline
Aalbaalba5_s005250050838310.1 Alkaloid NMT medium pass
Aalbaalba5_s005356510841940.1 Alkaloid NMT low borderline
Aalbaalba5_s005450040844950.1 Alkaloid NMT low borderline
Aalbaalba5_s005458020845210.1 Alkaloid NMT medium borderline
Aalbaalba5_s006122440862520.1 Alkaloid NMT medium borderline
Aalbaalba5_s006203530864350.1 Alkaloid NMT medium pass
Aalbaalba5_s006249570865300.1 Alkaloid NMT low borderline
Aalbaalba5_s006345250867380.1 Alkaloid NMT low borderline
Aalbaalba5_s006435560869130.1 Alkaloid NMT medium borderline
Aalbaalba5_s006889720877370.1 Alkaloid NMT medium borderline
Aalbaalba5_s007030530880130.1 Alkaloid NMT medium pass
Aalbaalba5_s009944760911880.1 Alkaloid NMT medium borderline
Aalbaalba5_s011707590922500.1 Alkaloid NMT medium pass
Aalbaalba5_s000012040011070.1 Alkaloid PMT medium pass
Aalbaalba5_s000063060047290.1 Alkaloid PMT medium borderline
Aalbaalba5_s000089700064050.1 Alkaloid PMT low borderline
Aalbaalba5_s000139820091040.1 Alkaloid PMT medium borderline
Aalbaalba5_s000384990202980.1 Alkaloid PMT low borderline
Aalbaalba5_s000589060282360.1 Alkaloid PMT low borderline
Aalbaalba5_s000870710368560.1 Alkaloid PMT low borderline