PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

2579
Candidate Protein Records
1885
Pathway-Level Records
4430
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Aalbaalba5_s000880550371490.1 Alkaloid PMT low borderline
Aalbaalba5_s000930170384850.1 Alkaloid PMT medium borderline
Aalbaalba5_s001089760426730.1 Alkaloid PMT low borderline
Aalbaalba5_s001092110427290.1 Alkaloid PMT low borderline
Aalbaalba5_s001447870505050.1 Alkaloid PMT medium borderline
Aalbaalba5_s001498420515520.1 Alkaloid PMT medium pass
Aalbaalba5_s001560360527300.1 Alkaloid PMT low borderline
Aalbaalba5_s001568220528880.1 Alkaloid PMT medium pass
Aalbaalba5_s001819380572670.1 Alkaloid PMT low borderline
Aalbaalba5_s002141460621090.1 Alkaloid PMT medium borderline
Aalbaalba5_s002212050630970.1 Alkaloid PMT low borderline
Aalbaalba5_s002365130649980.1 Alkaloid PMT low borderline
Aalbaalba5_s002962410711880.1 Alkaloid PMT medium pass
Aalbaalba5_s003075550721600.1 Alkaloid PMT low borderline
Aalbaalba5_s003159370728560.1 Alkaloid PMT medium borderline
Aalbaalba5_s003627210760670.1 Alkaloid PMT low borderline
Aalbaalba5_s003632100761000.1 Alkaloid PMT medium pass
Aalbaalba5_s004618320813390.1 Alkaloid PMT medium borderline
Aalbaalba5_s004704410816940.1 Alkaloid PMT low borderline
Aalbaalba5_s004841770822560.1 Alkaloid PMT medium borderline
Aalbaalba5_s004919330825820.1 Alkaloid PMT medium pass
Aalbaalba5_s000125880083980.1 Alkaloid PYKS low borderline
Aalbaalba5_s000125880083990.1 Alkaloid PYKS high pass
Aalbaalba5_s000164550103910.1 Alkaloid PYKS high pass
Aalbaalba5_s000166900105200.1 Alkaloid PYKS medium pass
Aalbaalba5_s000200900122390.1 Alkaloid PYKS high pass
Aalbaalba5_s000223780132630.1 Alkaloid PYKS low borderline
Aalbaalba5_s000235450137940.1 Alkaloid PYKS low borderline
Aalbaalba5_s000336140182040.1 Alkaloid PYKS low borderline
Aalbaalba5_s000441030226930.1 Alkaloid PYKS low borderline
Aalbaalba5_s000443290227790.1 Alkaloid PYKS low borderline
Aalbaalba5_s000452370231550.1 Alkaloid PYKS low borderline
Aalbaalba5_s000489320246620.1 Alkaloid PYKS low borderline
Aalbaalba5_s000502220251220.1 Alkaloid PYKS high pass
Aalbaalba5_s000502220251230.1 Alkaloid PYKS medium pass
Aalbaalba5_s000535410263440.1 Alkaloid PYKS low borderline
Aalbaalba5_s000627940295520.1 Alkaloid PYKS high pass
Aalbaalba5_s000633910297630.1 Alkaloid PYKS low borderline
Aalbaalba5_s000653920304100.1 Alkaloid PYKS high pass
Aalbaalba5_s000745070332090.1 Alkaloid PYKS low borderline
Aalbaalba5_s000808710351420.1 Alkaloid PYKS high pass
Aalbaalba5_s000923510383240.1 Alkaloid PYKS high pass
Aalbaalba5_s000958620392500.1 Alkaloid PYKS low borderline
Aalbaalba5_s000978580397990.1 Alkaloid PYKS low borderline
Aalbaalba5_s001088980426480.1 Alkaloid PYKS low borderline
Aalbaalba5_s001272510468580.1 Alkaloid PYKS high pass
Aalbaalba5_s001396410494830.1 Alkaloid PYKS low borderline
Aalbaalba5_s001447380504910.1 Alkaloid PYKS high pass
Aalbaalba5_s001503850516420.1 Alkaloid PYKS high pass
Aalbaalba5_s001570850529420.1 Alkaloid PYKS medium pass