PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Aalbaalba5_s000349670187870.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000408340212780.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000474090240530.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000475900241280.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s000481650243790.1 Alkaloid 7DLGT high pass
Aalbaalba5_s000502330251330.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000534210263000.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000542850266080.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000581520279800.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000595840284700.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000607030288480.1 Alkaloid 7DLGT high pass
Aalbaalba5_s000639990299800.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s000657380305190.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s000746960332610.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000761700337350.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000761700337350.2 Alkaloid 7DLGT medium pass
Aalbaalba5_s000769960339720.1 Alkaloid 7DLGT high pass
Aalbaalba5_s000781780343020.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s000804120350090.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s000820390354860.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000820390354860.2 Alkaloid 7DLGT medium pass
Aalbaalba5_s000835000358860.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000850340362960.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s000859330365380.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s000927180384110.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s000940340387870.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s000961560393280.1 Alkaloid 7DLGT high pass
Aalbaalba5_s000974060396750.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001027790410630.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001027790410630.2 Alkaloid 7DLGT medium pass
Aalbaalba5_s001037440412860.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s001161290443700.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s001192940450680.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001223780457850.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001239540461170.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s001324170479460.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001324170479470.1 Alkaloid 7DLGT high pass
Aalbaalba5_s001363260487650.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s001363260487650.2 Alkaloid 7DLGT low borderline
Aalbaalba5_s001390540493620.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001414860498510.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001425100500480.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001425180500510.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s001499400515670.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001518920519380.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001624400539490.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001636230541830.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s001733190558880.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s001865630580310.1 Alkaloid 7DLGT high pass
Aalbaalba5_s001994750600430.1 Alkaloid 7DLGT low borderline