PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Aalbaalba5_s002058900609460.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s002088240613870.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s002094520614750.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s002136090620300.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s002137710620610.1 Alkaloid 7DLGT high pass
Aalbaalba5_s002206520630210.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s002286850640140.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s002538780670130.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s002569280673750.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s002577840674650.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s002585510675400.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s002612580678450.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s002635560680650.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s002756600692770.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s003504370753140.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s003890540776610.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s004023100784070.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s004033610784610.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s004253860796700.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s004598460812570.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s004735930818270.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s004768170819500.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s004847730822910.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s004976070828420.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s005454860845080.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s005720710852820.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s007479190887110.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s008552450899720.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s009019600904400.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s016388760936310.1 Alkaloid 7DLGT high pass
Aalbaalba5_s017744270939370.1 Alkaloid 7DLGT medium pass
Aalbaalba5_s022099570941660.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s023113240941690.1 Alkaloid 7DLGT low borderline
Aalbaalba5_s000009110008690.1 Alkaloid 7DLH medium borderline
Aalbaalba5_s000280500157890.1 Alkaloid 7DLH low borderline
Aalbaalba5_s000299950166230.1 Alkaloid 7DLH low borderline
Aalbaalba5_s000312860171860.1 Alkaloid 7DLH low borderline
Aalbaalba5_s000547350267900.1 Alkaloid 7DLH low borderline
Aalbaalba5_s000779750342440.1 Alkaloid 7DLH medium borderline
Aalbaalba5_s000968850395390.1 Alkaloid 7DLH low borderline
Aalbaalba5_s001182210448460.1 Alkaloid 7DLH low borderline
Aalbaalba5_s002637410680870.1 Alkaloid 7DLH low borderline
Aalbaalba5_s002827690699830.1 Alkaloid 7DLH low borderline
Aalbaalba5_s003140240726900.1 Alkaloid 7DLH medium borderline
Aalbaalba5_s003507610753370.1 Alkaloid 7DLH medium borderline
Aalbaalba5_s007950760893020.1 Alkaloid 7DLH low borderline
Aalbaalba5_s008630070900690.1 Alkaloid 7DLH low borderline
Aalbaalba5_s001967510596410.1 Alkaloid 8HGO low borderline
Aalbaalba5_s001986980599420.1 Alkaloid 8HGO low borderline
Aalbaalba5_s006993210879340.1 Alkaloid 8HGO low borderline