PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Aalbaalba5_s005836810855670.1 Flavonoid 4CL low borderline
Aalbaalba5_s005867180856480.1 Flavonoid 4CL low borderline
Aalbaalba5_s006042300860580.1 Flavonoid 4CL medium pass
Aalbaalba5_s006167280863660.1 Flavonoid 4CL low borderline
Aalbaalba5_s007012270879780.1 Flavonoid 4CL medium pass
Aalbaalba5_s007082590880960.1 Flavonoid 4CL medium pass
Aalbaalba5_s008404770898160.1 Flavonoid 4CL medium pass
Aalbaalba5_s014404990932060.1 Flavonoid 4CL medium pass
Aalbaalba5_s000017940015990.1 Flavonoid ANR low borderline
Aalbaalba5_s000107280074160.1 Flavonoid ANR medium borderline
Aalbaalba5_s000145640094150.1 Flavonoid ANR low borderline
Aalbaalba5_s000335210181680.1 Flavonoid ANR medium borderline
Aalbaalba5_s000462720235800.1 Flavonoid ANR medium borderline
Aalbaalba5_s000628530295750.1 Flavonoid ANR low borderline
Aalbaalba5_s000675520310820.1 Flavonoid ANR medium borderline
Aalbaalba5_s000719620324350.1 Flavonoid ANR low borderline
Aalbaalba5_s000735750329320.1 Flavonoid ANR medium borderline
Aalbaalba5_s000919850382260.1 Flavonoid ANR medium borderline
Aalbaalba5_s000936820386990.1 Flavonoid ANR low borderline
Aalbaalba5_s000971880396130.1 Flavonoid ANR medium borderline
Aalbaalba5_s000988550400740.1 Flavonoid ANR medium borderline
Aalbaalba5_s001031790411620.1 Flavonoid ANR low borderline
Aalbaalba5_s001116000432900.1 Flavonoid ANR low borderline
Aalbaalba5_s001286460471630.1 Flavonoid ANR low borderline
Aalbaalba5_s001447280504900.1 Flavonoid ANR medium borderline
Aalbaalba5_s001578010530480.1 Flavonoid ANR low borderline
Aalbaalba5_s001791460568130.1 Flavonoid ANR low borderline
Aalbaalba5_s001877550582430.1 Flavonoid ANR medium borderline
Aalbaalba5_s001877550582430.2 Flavonoid ANR medium borderline
Aalbaalba5_s002534600669640.1 Flavonoid ANR medium borderline
Aalbaalba5_s002574120674200.1 Flavonoid ANR medium borderline
Aalbaalba5_s002635190680620.1 Flavonoid ANR medium borderline
Aalbaalba5_s003390580745730.2 Flavonoid ANR medium borderline
Aalbaalba5_s004301800799160.1 Flavonoid ANR medium borderline
Aalbaalba5_s006464660869660.1 Flavonoid ANR low borderline
Aalbaalba5_s006744410875020.1 Flavonoid ANR low borderline
Aalbaalba5_s006843940876700.1 Flavonoid ANR medium pass
Aalbaalba5_s000187460115910.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s000213230128090.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s000213230128090.2 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s000548700268320.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s000710840321760.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s000935140386450.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s000935140386450.2 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s000949300390110.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s000956610392020.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s001373450489900.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s001505360516650.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s001557020526570.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s001567460528750.1 Flavonoid ANS/LDOX medium borderline