PlantSME Plant secondary metabolism enzyme database

Abies alba (abies_alba)

Imported from atlas release summary for Abies alba.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 512 18 BAHD (205) View species results
Phenylpropanoid pathway 501 12 POD (206) View species results
Alkaloid pathway 348 23 NMT (65) View species results
Flavonoid pathway 256 15 4CL (85) View species results
Rosmarinic acid pathway 177 7 4CL (85) View species results
Steroid pathway 91 12 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1397 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 370 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Aalbaalba5_s001575530530100.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s002078320612460.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s002128940619240.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s002130850619540.1 Flavonoid ANS/LDOX low borderline
Aalbaalba5_s002304660642420.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s002572100674040.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s003077560721720.1 Flavonoid ANS/LDOX medium pass
Aalbaalba5_s003135990726560.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s003337840742010.1 Flavonoid ANS/LDOX medium borderline
Aalbaalba5_s004801000820840.1 Flavonoid ANS/LDOX low borderline
Aalbaalba5_s010273780914390.1 Flavonoid ANS/LDOX low borderline
Aalbaalba5_s017893590939660.1 Flavonoid ANS/LDOX medium pass
Aalbaalba5_s000016540014720.1 Flavonoid C4H low borderline
Aalbaalba5_s000040240032690.1 Flavonoid C4H low borderline
Aalbaalba5_s000180920112470.1 Flavonoid C4H low borderline
Aalbaalba5_s000231970136530.1 Flavonoid C4H medium borderline
Aalbaalba5_s000256140147600.1 Flavonoid C4H low borderline
Aalbaalba5_s000680540312400.1 Flavonoid C4H medium borderline
Aalbaalba5_s000696040317340.1 Flavonoid C4H low borderline
Aalbaalba5_s000851300363290.1 Flavonoid C4H medium pass
Aalbaalba5_s001626540539850.1 Flavonoid C4H low borderline
Aalbaalba5_s001664390546920.1 Flavonoid C4H low borderline
Aalbaalba5_s001713960555830.1 Flavonoid C4H medium pass
Aalbaalba5_s002145520621760.1 Flavonoid C4H medium borderline
Aalbaalba5_s002532800669420.1 Flavonoid C4H low borderline
Aalbaalba5_s002702230687480.1 Flavonoid C4H low borderline
Aalbaalba5_s003160100728620.1 Flavonoid C4H medium borderline
Aalbaalba5_s003507610753370.1 Flavonoid C4H medium borderline
Aalbaalba5_s005668630851420.1 Flavonoid C4H low borderline
Aalbaalba5_s007351380885250.1 Flavonoid C4H low borderline
Aalbaalba5_s007765770890710.1 Flavonoid C4H low borderline
Aalbaalba5_s000657870305390.1 Flavonoid CHI medium pass
Aalbaalba5_s000818430354290.1 Flavonoid CHI medium pass
Aalbaalba5_s001475910510730.1 Flavonoid CHI medium pass
Aalbaalba5_s001475910510730.2 Flavonoid CHI medium pass
Aalbaalba5_s000053580041300.1 Flavonoid CHS medium pass
Aalbaalba5_s000077770056830.1 Flavonoid CHS low borderline
Aalbaalba5_s000125880083980.1 Flavonoid CHS low borderline
Aalbaalba5_s000125880083990.1 Flavonoid CHS medium pass
Aalbaalba5_s000164550103910.1 Flavonoid CHS medium pass
Aalbaalba5_s000166900105200.1 Flavonoid CHS medium pass
Aalbaalba5_s000200900122390.1 Flavonoid CHS medium pass
Aalbaalba5_s000502220251220.1 Flavonoid CHS medium pass
Aalbaalba5_s000502220251230.1 Flavonoid CHS medium pass
Aalbaalba5_s000627940295520.1 Flavonoid CHS medium pass
Aalbaalba5_s000653920304100.1 Flavonoid CHS medium pass
Aalbaalba5_s000808710351420.1 Flavonoid CHS medium pass
Aalbaalba5_s000923510383240.1 Flavonoid CHS medium pass
Aalbaalba5_s001272510468580.1 Flavonoid CHS medium pass
Aalbaalba5_s001447380504910.1 Flavonoid CHS medium pass