PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

1961
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
alnus_rubra_ALNRU00013563-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00031035-RA Phenylpropanoid COMT low borderline
alnus_rubra_ALNRU00040960-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00040966-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00040969-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00040972-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00041884-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00041887-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00047514-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00047519-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00047523-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00059867-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00059877-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00059879-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00059880-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00059883-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00059884-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00061581-RA Phenylpropanoid COMT low borderline
alnus_rubra_ALNRU00069562-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00069574-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00073306-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00076234-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00090858-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00112291-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00112317-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00115617-RA Phenylpropanoid COMT low borderline
alnus_rubra_ALNRU00116170-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00116177-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00116178-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00122331-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00122336-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00122337-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00124718-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00125629-RA Phenylpropanoid COMT low borderline
alnus_rubra_ALNRU00125633-RA Phenylpropanoid COMT medium pass
alnus_rubra_ALNRU00125634-RA Phenylpropanoid COMT medium pass