PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

1961
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
alnus_rubra_ALNRU00003290-RA Steroid BR6OX1/CYP85A1 low borderline
alnus_rubra_ALNRU00006441-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00010499-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00010896-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00013073-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00013087-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00013108-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00018580-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00032029-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00034415-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00037096-RA Steroid BR6OX1/CYP85A1 low borderline
alnus_rubra_ALNRU00041679-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00041684-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00041693-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00041706-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00047577-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00049955-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00077056-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00085525-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00108102-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00125256-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00127145-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00134681-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00136620-RA Steroid BR6OX1/CYP85A1 medium borderline
alnus_rubra_ALNRU00138549-RA Steroid BR6OX1/CYP85A1 low borderline
alnus_rubra_ALNRU00000313-RA Steroid BR6OX2/CYP85A2 medium borderline
alnus_rubra_ALNRU00000812-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00002259-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00002532-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00003270-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00003289-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00003318-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00003369-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00004681-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00004682-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00004688-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00010590-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00013496-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00021755-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00021761-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00026257-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00026278-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00026608-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00026843-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00033296-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00034236-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00035808-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00035813-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00035815-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00035832-RA Steroid BR6OX2/CYP85A2 low borderline