PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

1961
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
alnus_rubra_ALNRU00035838-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00041736-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00041738-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00042665-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00045973-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00047045-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00048013-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00048038-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00048130-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00051243-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00052668-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00052679-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00060055-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00062402-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00070194-RA Steroid BR6OX2/CYP85A2 medium borderline
alnus_rubra_ALNRU00074335-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00075167-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00075551-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00077161-RA Steroid BR6OX2/CYP85A2 medium pass
alnus_rubra_ALNRU00081108-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00086370-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00087251-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00093869-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00093872-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00093881-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00093904-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00093909-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00093914-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00093934-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00093937-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00095966-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00096015-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00100871-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00101754-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00106697-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00114399-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00119800-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00123534-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00123666-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00124717-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00127174-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00129986-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00132533-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00135122-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00137157-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00137293-RA Steroid BR6OX2/CYP85A2 medium borderline
alnus_rubra_ALNRU00138548-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00138591-RA Steroid BR6OX2/CYP85A2 low borderline
alnus_rubra_ALNRU00141243-RA Steroid BR6OX2/CYP85A2 medium borderline
alnus_rubra_ALNRU00141326-RA Steroid BR6OX2/CYP85A2 low borderline