PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

/

Imported from atlas release summary for Alnus rubra.

1961
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
Reset
Gene Pathway Family Confidence Status
alnus_rubra_ALNRU00000354-RA Alkaloid G8O/G8H low borderline
alnus_rubra_ALNRU00003290-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00003369-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00004692-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00004933-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00013143-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00027975-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00033028-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00035808-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00035813-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00035815-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00035838-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00041523-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00041527-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00041537-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00041543-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00041706-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00041736-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00042665-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00051243-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00060055-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00064325-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00064668-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00064682-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00073152-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00074000-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00074773-RA Alkaloid G8O/G8H low borderline
alnus_rubra_ALNRU00092227-RA Alkaloid G8O/G8H low borderline
alnus_rubra_ALNRU00104917-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00104929-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00106783-RA Alkaloid G8O/G8H low borderline
alnus_rubra_ALNRU00121407-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00123534-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00127145-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00127896-RA Alkaloid G8O/G8H low borderline
alnus_rubra_ALNRU00131031-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00132779-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00132796-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00135816-RA Alkaloid G8O/G8H medium borderline
alnus_rubra_ALNRU00138549-RA Alkaloid G8O/G8H medium borderline